Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-1A0A075B699 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm15565-201ENSMUST00000118890 427 ntBASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm45058-201ENSMUST00000205810 766 ntBASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.3□□□□□ -0.44
Trav9d-1A0A075B699 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-1A0A075B699 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav9d-1A0A075B699 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms