Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.67□□□□□ -0.38
Trav17A0A075B655 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav17A0A075B655 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.67□□□□□ -0.38
Trav17A0A075B655 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav17A0A075B655 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Gm11539-201ENSMUST00000119837 557 ntBASIC12.66□□□□□ -0.38
Trav17A0A075B655 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav17A0A075B655 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.65□□□□□ -0.38
Trav17A0A075B655 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Gm3375-201ENSMUST00000203929 796 ntBASIC12.65□□□□□ -0.38
Trav17A0A075B655 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.65□□□□□ -0.38
Trav17A0A075B655 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav17A0A075B655 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav17A0A075B655 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trav17A0A075B655 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.64□□□□□ -0.39
Trav17A0A075B655 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav17A0A075B655 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms