Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav4-4-dv10A0A075B651 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm8520-201ENSMUST00000186517 868 ntBASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav4-4-dv10A0A075B651 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-4-dv10A0A075B651 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav4-4-dv10A0A075B651 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trav4-4-dv10A0A075B651 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav4-4-dv10A0A075B651 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Trav4-4-dv10A0A075B651 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms