Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Il3ra-202ENSMUST00000223589 738 ntBASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Ntrk2-205ENSMUST00000224402 2284 ntBASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav13-2A0A075B649 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Gm5643-201ENSMUST00000117081 966 ntBASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Gm10698-201ENSMUST00000182663 604 ntBASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 AC135637.1-201ENSMUST00000227750 365 ntBASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Trav13-2A0A075B649 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Trav13-2A0A075B649 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Ccdc166-201ENSMUST00000182172 2584 ntBASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Gm7791-201ENSMUST00000219066 539 ntBASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav13-2A0A075B649 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Actl10-202ENSMUST00000226583 1501 ntBASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav13-2A0A075B649 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms