Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav13-1A0A075B644 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Gm13312-201ENSMUST00000119631 718 ntBASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav13-1A0A075B644 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Gm12644-201ENSMUST00000119935 606 ntBASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav13-1A0A075B644 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gm28659-201ENSMUST00000188013 759 ntBASIC11.31□□□□□ -0.6
Trav13-1A0A075B644 Gm34391-201ENSMUST00000203706 907 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms