Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav7n-4A0A075B620 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7n-4A0A075B620 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7n-4A0A075B620 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav7n-4A0A075B620 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav7n-4A0A075B620 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Gm2559-201ENSMUST00000201323 363 ntBASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 AV356131-201ENSMUST00000206201 750 ntBASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav7n-4A0A075B620 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav7n-4A0A075B620 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav7n-4A0A075B620 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms