Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm21596-201ENSMUST00000178049 1316 ntBASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm44672-201ENSMUST00000206944 1098 ntBASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm9731-201ENSMUST00000209480 747 ntBASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16d-dv11A0A075B617 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm44729-201ENSMUST00000206759 2052 ntBASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Gm13148-201ENSMUST00000118892 745 ntBASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16d-dv11A0A075B617 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16d-dv11A0A075B617 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Dio3-201ENSMUST00000097228 1449 ntBASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Gm13158-201ENSMUST00000122007 736 ntBASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16d-dv11A0A075B617 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms