Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm2274-201ENSMUST00000184539 609 ntBASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 BC037039-201ENSMUST00000192003 2205 ntBASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trav6-1A0A075B5Z8 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav6-1A0A075B5Z8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm10566-201ENSMUST00000086739 996 ntBASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav6-1A0A075B5Z8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav6-1A0A075B5Z8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms