Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav5-1A0A075B5Z7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm7222-201ENSMUST00000117512 906 ntBASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm11780-201ENSMUST00000136880 516 ntBASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm6089-201ENSMUST00000197666 938 ntBASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm44771-201ENSMUST00000206975 626 ntBASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav5-1A0A075B5Z7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav5-1A0A075B5Z7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms