Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav1A0A075B5Z4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav1A0A075B5Z4 Gm13312-201ENSMUST00000119631 718 ntBASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav1A0A075B5Z4 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav1A0A075B5Z4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Gm23634-201ENSMUST00000175071 91 ntBASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.75□□□□□ -0.05
Trav1A0A075B5Z4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Gm25406-201ENSMUST00000157599 105 ntBASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav1A0A075B5Z4 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms