Protein–RNA interactions for Protein: Q9ES97

Rtn3, Reticulon-3, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3Q9ES97 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rtn3Q9ES97 AC131739.1-201ENSMUST00000221692 1245 ntBASIC24.38■■□□□ 1.49
Rtn3Q9ES97 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.38■■□□□ 1.49
Rtn3Q9ES97 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.38■■□□□ 1.49
Rtn3Q9ES97 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rtn3Q9ES97 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Rtn3Q9ES97 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Rtn3Q9ES97 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn3Q9ES97 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Rtn3Q9ES97 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Rtn3Q9ES97 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Rtn3Q9ES97 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
Rtn3Q9ES97 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rtn3Q9ES97 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rtn3Q9ES97 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rtn3Q9ES97 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rtn3Q9ES97 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rtn3Q9ES97 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC24.3■■□□□ 1.48
Rtn3Q9ES97 Particl-201ENSMUST00000205370 1560 ntBASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rtn3Q9ES97 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Rtn3Q9ES97 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtn3Q9ES97 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtn3Q9ES97 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtn3Q9ES97 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rtn3Q9ES97 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rtn3Q9ES97 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC24.27■■□□□ 1.48
Rtn3Q9ES97 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Rtn3Q9ES97 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rtn3Q9ES97 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtn3Q9ES97 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtn3Q9ES97 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtn3Q9ES97 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rtn3Q9ES97 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Rtn3Q9ES97 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
Rtn3Q9ES97 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rtn3Q9ES97 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.22■■□□□ 1.47
Rtn3Q9ES97 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC24.22■■□□□ 1.47
Rtn3Q9ES97 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtn3Q9ES97 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rtn3Q9ES97 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Rtn3Q9ES97 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.21■■□□□ 1.47
Rtn3Q9ES97 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rtn3Q9ES97 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.21■■□□□ 1.47
Rtn3Q9ES97 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn3Q9ES97 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn3Q9ES97 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn3Q9ES97 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Rtn3Q9ES97 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC24.18■■□□□ 1.46
Rtn3Q9ES97 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC24.18■■□□□ 1.46
Rtn3Q9ES97 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn3Q9ES97 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn3Q9ES97 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn3Q9ES97 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn3Q9ES97 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Rtn3Q9ES97 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn3Q9ES97 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn3Q9ES97 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn3Q9ES97 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn3Q9ES97 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn3Q9ES97 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn3Q9ES97 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn3Q9ES97 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn3Q9ES97 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC24.12■■□□□ 1.45
Rtn3Q9ES97 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn3Q9ES97 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn3Q9ES97 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn3Q9ES97 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.11■■□□□ 1.45
Rtn3Q9ES97 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn3Q9ES97 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn3Q9ES97 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn3Q9ES97 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn3Q9ES97 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rtn3Q9ES97 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Rtn3Q9ES97 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn3Q9ES97 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
Rtn3Q9ES97 AC167019.3-201ENSMUST00000228225 1266 ntBASIC24.06■■□□□ 1.44
Rtn3Q9ES97 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Rtn3Q9ES97 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 192.7 ms