Protein–RNA interactions for Protein: Q9CY34

Ube2f, NEDD8-conjugating enzyme UBE2F, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fQ9CY34 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.72■□□□□ 0.91
Ube2fQ9CY34 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ube2fQ9CY34 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Ube2fQ9CY34 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube2fQ9CY34 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ube2fQ9CY34 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ube2fQ9CY34 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Ube2fQ9CY34 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ube2fQ9CY34 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube2fQ9CY34 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ube2fQ9CY34 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ube2fQ9CY34 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube2fQ9CY34 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ube2fQ9CY34 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.67■□□□□ 0.9
Ube2fQ9CY34 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ube2fQ9CY34 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Ube2fQ9CY34 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ube2fQ9CY34 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Ube2fQ9CY34 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Ube2fQ9CY34 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ube2fQ9CY34 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.63■□□□□ 0.89
Ube2fQ9CY34 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ube2fQ9CY34 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ube2fQ9CY34 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ube2fQ9CY34 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.61■□□□□ 0.89
Ube2fQ9CY34 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube2fQ9CY34 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.61■□□□□ 0.89
Ube2fQ9CY34 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ube2fQ9CY34 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ube2fQ9CY34 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ube2fQ9CY34 Particl-201ENSMUST00000205370 1560 ntBASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ube2fQ9CY34 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube2fQ9CY34 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube2fQ9CY34 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube2fQ9CY34 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ube2fQ9CY34 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ube2fQ9CY34 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
Ube2fQ9CY34 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ube2fQ9CY34 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ube2fQ9CY34 Gm30023-201ENSMUST00000197970 889 ntBASIC20.56■□□□□ 0.88
Ube2fQ9CY34 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ube2fQ9CY34 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ube2fQ9CY34 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube2fQ9CY34 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.55■□□□□ 0.88
Ube2fQ9CY34 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube2fQ9CY34 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube2fQ9CY34 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube2fQ9CY34 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ube2fQ9CY34 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ube2fQ9CY34 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Ube2fQ9CY34 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.52■□□□□ 0.88
Ube2fQ9CY34 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube2fQ9CY34 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube2fQ9CY34 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ube2fQ9CY34 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube2fQ9CY34 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.5■□□□□ 0.87
Ube2fQ9CY34 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube2fQ9CY34 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube2fQ9CY34 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms