Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Tsen54Q8C2A2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tsen54Q8C2A2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tsen54Q8C2A2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tsen54Q8C2A2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.04■□□□□ 0.64
Tsen54Q8C2A2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tsen54Q8C2A2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tsen54Q8C2A2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tsen54Q8C2A2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tsen54Q8C2A2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tsen54Q8C2A2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tsen54Q8C2A2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tsen54Q8C2A2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Tsen54Q8C2A2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tsen54Q8C2A2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Gm43863-201ENSMUST00000203822 1192 ntBASIC19■□□□□ 0.63
Tsen54Q8C2A2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tsen54Q8C2A2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
Tsen54Q8C2A2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tsen54Q8C2A2 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Tsen54Q8C2A2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tsen54Q8C2A2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tsen54Q8C2A2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tsen54Q8C2A2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Tsen54Q8C2A2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tsen54Q8C2A2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tsen54Q8C2A2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Tsen54Q8C2A2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tsen54Q8C2A2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.93■□□□□ 0.62
Tsen54Q8C2A2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Tsen54Q8C2A2 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.92■□□□□ 0.62
Tsen54Q8C2A2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tsen54Q8C2A2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Tsen54Q8C2A2 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Tsen54Q8C2A2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Tsen54Q8C2A2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Tsen54Q8C2A2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms