Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm9812-201ENSMUST00000061934 968 ntBASIC17.54■□□□□ 0.4
Hspg2Q05793 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hspg2Q05793 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hspg2Q05793 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hspg2Q05793 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hspg2Q05793 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hspg2Q05793 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.5■□□□□ 0.39
Hspg2Q05793 Gm15820-201ENSMUST00000201566 728 ntBASIC17.5■□□□□ 0.39
Hspg2Q05793 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hspg2Q05793 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.49■□□□□ 0.39
Hspg2Q05793 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.49■□□□□ 0.39
Hspg2Q05793 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hspg2Q05793 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hspg2Q05793 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hspg2Q05793 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 Serp2-204ENSMUST00000228055 705 ntBASIC17.47■□□□□ 0.39
Hspg2Q05793 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.47■□□□□ 0.39
Hspg2Q05793 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.47■□□□□ 0.39
Hspg2Q05793 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hspg2Q05793 Amer2-203ENSMUST00000225247 2662 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Gm10420-201ENSMUST00000121713 882 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.46■□□□□ 0.39
Hspg2Q05793 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hspg2Q05793 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hspg2Q05793 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.44■□□□□ 0.38
Hspg2Q05793 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hspg2Q05793 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.43■□□□□ 0.38
Hspg2Q05793 Rps24-207ENSMUST00000224568 714 ntBASIC17.43■□□□□ 0.38
Hspg2Q05793 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hspg2Q05793 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Hspg2Q05793 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hspg2Q05793 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hspg2Q05793 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.4■□□□□ 0.38
Hspg2Q05793 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Hspg2Q05793 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Hspg2Q05793 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hspg2Q05793 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Hspg2Q05793 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.39■□□□□ 0.37
Hspg2Q05793 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hspg2Q05793 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hspg2Q05793 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Gm45102-201ENSMUST00000207427 857 ntBASIC17.38■□□□□ 0.37
Hspg2Q05793 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hspg2Q05793 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.37■□□□□ 0.37
Hspg2Q05793 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
Hspg2Q05793 Gm13238-201ENSMUST00000117655 780 ntBASIC17.37■□□□□ 0.37
Hspg2Q05793 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hspg2Q05793 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hspg2Q05793 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hspg2Q05793 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Gm14117-201ENSMUST00000122417 843 ntBASIC17.36■□□□□ 0.37
Hspg2Q05793 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hspg2Q05793 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Hspg2Q05793 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Hspg2Q05793 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.35■□□□□ 0.37
Hspg2Q05793 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Hspg2Q05793 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 Zxda-201ENSMUST00000117281 2621 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.35■□□□□ 0.37
Hspg2Q05793 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.34■□□□□ 0.37
Hspg2Q05793 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm37136-201ENSMUST00000194368 194 ntBASIC17.34■□□□□ 0.37
Hspg2Q05793 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Hspg2Q05793 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.33■□□□□ 0.36
Hspg2Q05793 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Hspg2Q05793 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Hspg2Q05793 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.33■□□□□ 0.36
Hspg2Q05793 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.32■□□□□ 0.36
Hspg2Q05793 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Hspg2Q05793 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms