Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC33.09■■■□□ 2.89
Zc3h13E9Q784 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Zc3h13E9Q784 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Zc3h13E9Q784 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC33.08■■■□□ 2.89
Zc3h13E9Q784 AC093043.1-201ENSMUST00000226700 898 ntBASIC33.08■■■□□ 2.89
Zc3h13E9Q784 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
Zc3h13E9Q784 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
Zc3h13E9Q784 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC33.06■■■□□ 2.88
Zc3h13E9Q784 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC33.06■■■□□ 2.88
Zc3h13E9Q784 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC33.05■■■□□ 2.88
Zc3h13E9Q784 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Zc3h13E9Q784 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Zc3h13E9Q784 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Zc3h13E9Q784 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
Zc3h13E9Q784 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC33.03■■■□□ 2.88
Zc3h13E9Q784 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC33.03■■■□□ 2.88
Zc3h13E9Q784 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Zc3h13E9Q784 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC33.02■■■□□ 2.88
Zc3h13E9Q784 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC33.01■■■□□ 2.88
Zc3h13E9Q784 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Zc3h13E9Q784 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC33.01■■■□□ 2.87
Zc3h13E9Q784 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Zc3h13E9Q784 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Zc3h13E9Q784 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.87
Zc3h13E9Q784 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Zc3h13E9Q784 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Zc3h13E9Q784 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Zc3h13E9Q784 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Zc3h13E9Q784 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Zc3h13E9Q784 Rps24-207ENSMUST00000224568 714 ntBASIC32.98■■■□□ 2.87
Zc3h13E9Q784 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Zc3h13E9Q784 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC32.97■■■□□ 2.87
Zc3h13E9Q784 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC32.97■■■□□ 2.87
Zc3h13E9Q784 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC32.97■■■□□ 2.87
Zc3h13E9Q784 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Zc3h13E9Q784 Gm14121-201ENSMUST00000121441 1380 ntBASIC32.95■■■□□ 2.87
Zc3h13E9Q784 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC32.95■■■□□ 2.87
Zc3h13E9Q784 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC32.95■■■□□ 2.86
Zc3h13E9Q784 AC153911.1-201ENSMUST00000220378 758 ntBASIC32.94■■■□□ 2.86
Zc3h13E9Q784 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Zc3h13E9Q784 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC32.92■■■□□ 2.86
Zc3h13E9Q784 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Zc3h13E9Q784 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Zc3h13E9Q784 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC32.91■■■□□ 2.86
Zc3h13E9Q784 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
Zc3h13E9Q784 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
Zc3h13E9Q784 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC32.88■■■□□ 2.85
Zc3h13E9Q784 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
Zc3h13E9Q784 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
Zc3h13E9Q784 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
Zc3h13E9Q784 Terc-201ENSMUST00000082862 423 ntBASIC32.87■■■□□ 2.85
Zc3h13E9Q784 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
Zc3h13E9Q784 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Zc3h13E9Q784 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC32.85■■■□□ 2.85
Zc3h13E9Q784 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
Zc3h13E9Q784 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Zc3h13E9Q784 Gm15820-201ENSMUST00000201566 728 ntBASIC32.85■■■□□ 2.85
Zc3h13E9Q784 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Zc3h13E9Q784 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Zc3h13E9Q784 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC32.84■■■□□ 2.85
Zc3h13E9Q784 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
Zc3h13E9Q784 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
Zc3h13E9Q784 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC32.84■■■□□ 2.85
Zc3h13E9Q784 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
Zc3h13E9Q784 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Zc3h13E9Q784 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
Zc3h13E9Q784 Gm14117-201ENSMUST00000122417 843 ntBASIC32.82■■■□□ 2.85
Zc3h13E9Q784 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Zc3h13E9Q784 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Zc3h13E9Q784 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC32.81■■■□□ 2.84
Zc3h13E9Q784 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC32.8■■■□□ 2.84
Zc3h13E9Q784 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Zc3h13E9Q784 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC32.8■■■□□ 2.84
Zc3h13E9Q784 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC32.8■■■□□ 2.84
Zc3h13E9Q784 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC32.8■■■□□ 2.84
Zc3h13E9Q784 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Zc3h13E9Q784 Gm43566-201ENSMUST00000196851 808 ntBASIC32.79■■■□□ 2.84
Zc3h13E9Q784 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Zc3h13E9Q784 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC32.78■■■□□ 2.84
Zc3h13E9Q784 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Zc3h13E9Q784 Gm45102-201ENSMUST00000207427 857 ntBASIC32.76■■■□□ 2.83
Zc3h13E9Q784 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Zc3h13E9Q784 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Zc3h13E9Q784 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Zc3h13E9Q784 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC32.73■■■□□ 2.83
Zc3h13E9Q784 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
Zc3h13E9Q784 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC32.72■■■□□ 2.83
Zc3h13E9Q784 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Zc3h13E9Q784 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC32.71■■■□□ 2.83
Zc3h13E9Q784 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Zc3h13E9Q784 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Zc3h13E9Q784 Zxda-201ENSMUST00000117281 2621 ntBASIC32.7■■■□□ 2.83
Zc3h13E9Q784 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms