RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 KIR3DX1Q9H7L2 352 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 NOD2Q9HC29 1040 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF160Q9HCG1 818 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 METTL5Q9NRN9 209 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 IMP3Q9NV31 184 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 DHCR7Q9UBM7 475 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TRIM10Q9UDY6 481 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 NOCTQ9UK39 431 aaKnown RBP7.55□□□□□ -1.2
LINC01961-201ENST00000449954 MTMR6Q9Y217 621 aa7.55□□□□□ -1.2
LINC01961-201ENST00000449954 TGP01266 2768 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 NPIPA5E9PKD4 350 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 MAP2K7O14733 419 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SMAD7O15105 426 aaKnown RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FZD6O60353 706 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 LSM8O95777 96 aaKnown RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 F10P00742 488 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SERPINA7P05543 415 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 CYP11B1P15538 503 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 POLR2CP19387 275 aaPredicted RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 KIR2DL3P43628 341 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 CARSP49589 748 aaKnown RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SLC10A7Q0GE19 358 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 XRCC4Q13426 336 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 OLIG2Q13516 323 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 GALNT3Q14435 633 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 NKG7Q16617 165 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 CCDC40Q4G0X9 1142 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 VWA3BQ502W6 1294 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 COBLL1Q53SF7 1204 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ABHD17BQ5VST6 288 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ARSKQ6UWY0 536 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ACAD11Q709F0 780 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 OVCH1Q7RTY7 1134 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 C11orf96Q7Z7L8 435 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 TRAPPC5Q8IUR0 188 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 P3H2Q8IVL5 708 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SIAH3Q8IW03 269 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 CHERPQ8IWX8 916 aaKnown RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FAM20CQ8IXL6 584 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SMYD4Q8IYR2 804 aaPredicted RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 MARVELD2Q8N4S9 558 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SIRT6Q8N6T7 355 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FAM98AQ8NCA5 519 aaKnown RBP7.54□□□□□ -1.2
LINC01961-201ENST00000449954 CCHCR1Q8TD31 782 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FAM172AQ8WUF8 416 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 RXFP2Q8WXD0 754 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 GLYATL1Q969I3 302 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 PWWP2AQ96N64 755 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FRMD6Q96NE9 622 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 LYSMD1Q96S90 227 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SPATA16Q9BXB7 569 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 PDCL3Q9H2J4 239 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ARFGAP3Q9NP61 516 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 DMRT3Q9NQL9 472 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 SLC24A2Q9UI40 661 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 TEKT2Q9UIF3 430 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 PCDHA7Q9UN72 937 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 NPIPA1Q9UND3 350 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 ASB1Q9Y576 335 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 FHOD1Q9Y613 1164 aa7.54□□□□□ -1.2
LINC01961-201ENST00000449954 NSG1A0A0A6YYJ2 146 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 C1orf232A0A0U1RR37 186 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 A0A1B0GX78 115 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 C2CD4BA6NLJ0 364 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 DFFAO00273 331 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 PHF1O43189 567 aaPredicted RBP7.53□□□□□ -1.2
LINC01961-201ENST00000449954 TNFRSF21O75509 655 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CDK14O94921 469 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CLDN7O95471 211 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 ONECUT2O95948 504 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 PDHA1P08559 390 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CA4P22748 312 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 NDUFS1P28331 727 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 PRDX3P30048 256 aaKnown RBP7.53□□□□□ -1.2
LINC01961-201ENST00000449954 NSG1P42857 185 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 RAB28P51157 221 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 BPIFB4P59827 614 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 DCDC1P59894 354 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 ANKRD20A8PQ5CZ79 823 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CATSPEREQ5SY80 951 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 ZNF648Q5T619 568 aaPredicted RBP7.53□□□□□ -1.2
LINC01961-201ENST00000449954 FBXW10Q5XX13 1052 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CNSTQ6PJW8 725 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 PRSS57Q6UWY2 283 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 TMEM151BQ8IW70 566 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 FAM57AQ8TBR7 257 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 GPT2Q8TD30 523 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 SEC16BQ96JE7 1060 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 Q96MF0 132 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 NUP85Q9BW27 656 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 CHRNA10Q9GZZ6 450 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 TP63Q9H3D4 680 aaPredicted RBP7.53□□□□□ -1.2
LINC01961-201ENST00000449954 SLC22A11Q9NSA0 550 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 TAS2R14Q9NYV8 317 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 NFKBIL1Q9UBC1 381 aaPredicted RBP7.53□□□□□ -1.2
LINC01961-201ENST00000449954 APEX2Q9UBZ4 518 aa7.53□□□□□ -1.2
LINC01961-201ENST00000449954 A0A1W2PQ72 361 aa7.52□□□□□ -1.21
LINC01961-201ENST00000449954 EIF3CLB5ME19 914 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms