RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 BRSK1Q8TDC3 778 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 GTF2H4Q92759 462 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 INPP5KQ9BT40 448 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 BTBD2Q9BX70 525 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 IPPKQ9H8X2 491 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PKP3Q9Y446 797 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF451Q9Y4E5 1061 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MBLAC1A4D2B0 266 aaPredicted RBP9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ANKRD28O15084 1053 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 SSX4O60224 188 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 CD36P16671 472 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PSEN2P49810 448 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MVKQ03426 396 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MBOAT1Q6ZNC8 495 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 LRRC8DQ7L1W4 858 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 GOLGA7Q7Z5G4 137 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 TLK2Q86UE8 772 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
PTPRA-203ENST00000356147 HEATR4Q86WZ0 1026 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 METTL23Q86XA0 190 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MICU2Q8IYU8 434 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 LIX1Q8N485 282 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 LGALS12Q96DT0 336 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ZNF641Q96N77 438 aaPredicted RBP9.95□□□□□ -0.82
PTPRA-203ENST00000356147 ASPSCR1Q9BZE9 553 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 POLR1EQ9GZS1 481 aaKnown RBP9.95□□□□□ -0.82
PTPRA-203ENST00000356147 MAGEE1Q9HCI5 957 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PPP2R3BQ9Y5P8 575 aa9.95□□□□□ -0.82
PTPRA-203ENST00000356147 PDE4DIPQ5VU43 2346 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 LOC100506127A0A0U1RQW1 187 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 OR7A17O14581 309 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 NDUFB5O43674 189 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 FAM20BO75063 409 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CREG1O75629 220 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 RECQL5O94762 991 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CYP11A1P05108 521 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 MC4RP32245 332 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CLK1P49759 484 aaKnown RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CLK3P49761 638 aaKnown RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CRYBB1P53674 252 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 IL2P60568 153 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CYP4F2P78329 520 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 ADAM17P78536 824 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 TSPY1Q01534 308 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CTSL3PQ5NE16 218 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 FAM171BQ6P995 826 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 VTCN1Q7Z7D3 282 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 UMODL1-AS1Q8N2C9 162 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 TTC30BQ8N4P2 665 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 DPP10Q8N608 796 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 DYNC2LI1Q8TCX1 351 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 TSPEARQ8WU66 669 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 OR52E6Q96RD3 313 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 DSN1Q9H410 356 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 TMED5Q9Y3A6 229 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 ORC6Q9Y5N6 252 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 A0A096LPI6 279 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 LINC00854A0A1B0GVQ3 168 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 A8MV72 311 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 PDHXO00330 501 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 SEC22BO75396 215 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 VPS26AO75436 327 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 KCNK2O95069 426 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 PKMP14618 531 aaKnown RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 RHOQP17081 205 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 C21orf33P30042 268 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 ALDH7A1P49419 539 aaKnown RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 SLC14A1Q13336 389 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 GBX1Q14549 363 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 PRSS36Q5K4E3 855 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 DEPDC1Q5TB30 811 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 GPR142Q7Z601 462 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CLDN19Q8N6F1 224 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 CD200R1Q8TD46 325 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 GIPC2Q8TF65 315 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 ZHX1-C8orf76Q96EF9 292 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 DPY30Q9C005 99 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 NDEL1Q9GZM8 345 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 SLIRPQ9GZT3 109 aaKnown RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 IL37Q9NZH6 218 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 ANKMY1Q9P2S6 941 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 GMPPBQ9Y5P6 360 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 NOX1Q9Y5S8 564 aa9.94□□□□□ -0.82
PTPRA-203ENST00000356147 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
PTPRA-203ENST00000356147 KRT87PA6NCN2 255 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TNFRSF10BO14763 440 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SNPHO15079 494 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SERPINF2P08697 491 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 DAPP51397 102 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 NUDT6P53370 316 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PHC1P78364 1004 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 TP53BP2Q13625 1128 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 BCL2A1Q16548 175 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 FXNQ16595 210 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 STEAP3Q658P3 488 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 SUSD1Q6UWL2 747 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ADHFE1Q8IWW8 467 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 ATAD1Q8NBU5 361 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 NLGN2Q8NFZ4 835 aa9.93□□□□□ -0.82
PTPRA-203ENST00000356147 PJA1Q8NG27 643 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms