RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 EPCAMP16422 314 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PSMC3P17980 439 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 FASP25445 335 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 IL12AP29459 219 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 DGKGP49619 791 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 CLCN2P51788 898 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 AP1S2P56377 157 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 NTHL1P78549 312 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MAP7Q14244 749 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 GRM2Q14416 872 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 NRF1Q16656 503 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 CYP51A1Q16850 503 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SGO1Q5FBB7 561 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ARSIQ5FYB1 569 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ERAP2Q6P179 960 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SLC2A7Q6PXP3 512 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 UGT2A3Q6UWM9 527 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 GRASPQ7Z6J2 395 aaPredicted RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 AMIGO2Q86SJ2 522 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PROSER1Q86XN7 944 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PTRH1Q86Y79 214 aaKnown RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 HID1Q8IV36 788 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 FAM9CQ8IZT9 166 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 TRAM1L1Q8N609 369 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SPPL3Q8TCT6 385 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MCOLN3Q8TDD5 553 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ASZ1Q8WWH4 475 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SLC13A3Q8WWT9 602 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ING5Q8WYH8 240 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 BADQ92934 168 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 VOPP1Q96AW1 172 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 LRIG1Q96JA1 1093 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 OSBPL11Q9BXB4 747 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MTIF3Q9H2K0 278 aaKnown RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ELOVL6Q9H5J4 265 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PIDD1Q9HB75 910 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 ZFP14Q9HCL3 533 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 PCDH12Q9NPG4 1184 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 INTS7Q9NVH2 962 aaKnown RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 WBP1LQ9NX94 342 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 GMPR2Q9P2T1 348 aaKnown RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 NFKBIL1Q9UBC1 381 aaPredicted RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MAGEL2Q9UJ55 1249 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 SNX6Q9UNH7 406 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 RNF11Q9Y3C5 154 aa8.09□□□□□ -1.12
VAMP3-201ENST00000054666 MRPS23Q9Y3D9 190 aaKnown RBP8.09□□□□□ -1.12
VAMP3-201ENST00000054666 TSPAN11A1L157 253 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 TTC34A8MYJ7 566 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ARNTLO00327 626 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 SEC22BO75396 215 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 MTX2O75431 263 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 SRPRAP08240 638 aaKnown RBP8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ELFN1P0C7U0 828 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 UMPSP11172 480 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ADH5P11766 374 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 CEBPBP17676 345 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 PAX7P23759 505 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 MAP4P27816 1152 aaKnown RBP8.08□□□□□ -1.12
VAMP3-201ENST00000054666 MAPK1P28482 360 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 HTR1EP28566 365 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 WEE1P30291 646 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 HMGCS1Q01581 520 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 CREB5Q02930 508 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 GBX1Q14549 363 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 CPSF6Q16630 551 aaKnown RBP eCLIP8.08□□□□□ -1.12
VAMP3-201ENST00000054666 GGTA1PQ4G0N0 100 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 RFTN2Q52LD8 501 aaPredicted RBP8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF805Q5CZA5 627 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 PRSS36Q5K4E3 855 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 C6orf52Q5T4I8 152 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 RNF220Q5VTB9 566 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 NANOGP8Q6NSW7 305 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ZBTB49Q6ZSB9 765 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 NEK10Q6ZWH5 1172 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 TRIM46Q7Z4K8 759 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 HSD11B1LQ7Z5J1 315 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 KIAA2013Q8IYS2 634 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 CELF5Q8N6W0 485 aaKnown RBP8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ANKFN1Q8N957 763 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 DDHD1Q8NEL9 900 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 FRS2Q8WU20 508 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 SELENOMQ8WWX9 145 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 USP7Q93009 1102 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 SCAMP4Q969E2 229 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 TMEM74Q96NL1 305 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 CIB1Q99828 191 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 TRIM8Q9BZR9 551 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 COQ10BQ9H8M1 238 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 NANOGQ9H9S0 305 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 C1orf109Q9NX04 203 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ASIC5Q9NY37 505 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 ANAPC2Q9UJX6 822 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 PLXNA2O75051 1894 aa8.08□□□□□ -1.12
VAMP3-201ENST00000054666 AP1G1O43747 822 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 TPST1O60507 370 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 IL6P05231 212 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 FAM58BPP0C7Q3 252 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 BMP2P12643 396 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 PCSK2P16519 638 aa8.07□□□□□ -1.12
VAMP3-201ENST00000054666 ZNF26P17031 533 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms