RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 NSMCE4AQ9NXX6 385 aa19.8■□□□□ 0.76
PTCD3-202ENST00000409326 CORO1CQ9ULV4 474 aaPredicted RBP19.8■□□□□ 0.76
PTCD3-202ENST00000409326 CSO75390 466 aaKnown RBP19.79■□□□□ 0.76
PTCD3-202ENST00000409326 SPAG6O75602 509 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 ATP5DP30049 168 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 CSF2RBP32927 897 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 KRT33BQ14525 404 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 ISXQ2M1V0 245 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 TEX35Q5T0J7 233 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 TMPRSS9Q7Z410 1059 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 PIM3Q86V86 326 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 MARCH9Q86YJ5 346 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 ZBTB2Q8N680 514 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 CDKL2Q92772 493 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 FERD3LQ96RJ6 166 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 NUDT22Q9BRQ3 303 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 RDH14Q9HBH5 336 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 SMYD2Q9NRG4 433 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 KLHL42Q9P2K6 505 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 GALPQ9UBC7 116 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 SLC24A2Q9UI40 661 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 ASF1AQ9Y294 204 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 MSRB2Q9Y3D2 182 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 PSAT1Q9Y617 370 aa19.79■□□□□ 0.76
PTCD3-202ENST00000409326 UBXN7O94888 489 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 STX2P32856 288 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 MAPK9P45984 424 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 CFHR1Q03591 330 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 PLCL1Q15111 1095 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 USP53Q70EK8 1073 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 SLITRK4Q8IW52 837 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 ACVR1CQ8NER5 493 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 GIMAP7Q8NHV1 300 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 GRAMD1AQ96CP6 724 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 NDNQ99608 321 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 OGFRQ9NZT2 677 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 NFU1Q9UMS0 254 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 ENTPD2Q9Y5L3 495 aa19.78■□□□□ 0.76
PTCD3-202ENST00000409326 FAM159BA6NKW6 160 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 VPS26AO75436 327 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 C1QAP02745 245 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 PROS1P07225 676 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 CCKBRP32239 447 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 ABCG1P45844 678 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 CAPZBP47756 277 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 PPM1FP49593 454 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-202ENST00000409326 TTLL9Q3SXZ7 439 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 RBM20Q5T481 1227 aaKnown RBP19.77■□□□□ 0.76
PTCD3-202ENST00000409326 WDR74Q6RFH5 385 aaPredicted RBP19.77■□□□□ 0.76
PTCD3-202ENST00000409326 UNC5DQ6UXZ4 953 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 STRA8Q7Z7C7 330 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 B3GNT8Q7Z7M8 397 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 TBC1D21Q8IYX1 336 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 SIDT2Q8NBJ9 832 aaKnown RBP19.77■□□□□ 0.76
PTCD3-202ENST00000409326 PHC3Q8NDX5 983 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 OR4D9Q8NGE8 314 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 OR5AR1Q8NGP9 310 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 OR5K2Q8NHB8 316 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 TMEM74Q96NL1 305 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 GPR21Q99679 349 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 SLC30A3Q99726 388 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 ZMYND15Q9H091 742 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 TRIT1Q9H3H1 467 aaKnown RBP19.77■□□□□ 0.76
PTCD3-202ENST00000409326 NINJ2Q9NZG7 142 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 DHRS7Q9Y394 339 aa19.77■□□□□ 0.76
PTCD3-202ENST00000409326 WDFY3Q8IZQ1 3526 aa19.77■□□□□ 0.75
PTCD3-202ENST00000409326 CXorf49A8MYA2 514 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 TMX2-CTNND1H3BSU7 103 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 HOXB3P14651 431 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 TYRP1P17643 537 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 AMD1P17707 334 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 CD9P21926 228 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 INHBCP55103 352 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 ZFP36L1Q07352 338 aaKnown RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 CAMK2BQ13554 666 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 ACSBG2Q5FVE4 666 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 FAM45BPQ6NSW5 357 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 UGT3A1Q6NUS8 523 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 TMEM71Q6P5X7 295 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 ZNF574Q6ZN55 896 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 ZC3HC1Q86WB0 502 aaKnown RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 FAM45AQ8TCE6 357 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 CD200R1Q8TD46 325 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 FBF1Q8TES7 1133 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 JPH3Q8WXH2 748 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 NCSTNQ92542 709 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 RSC1A1Q92681 617 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 MCMBPQ9BTE3 642 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 HGH1Q9BTY7 390 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 CDC42EP4Q9H3Q1 356 aaKnown RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 TAS2R13Q9NYV9 303 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 CEP295Q9C0D2 2601 aa19.76■□□□□ 0.75
PTCD3-202ENST00000409326 MN1Q10571 1320 aaPredicted RBP19.76■□□□□ 0.75
PTCD3-202ENST00000409326 AKAP13Q12802 2813 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 IGHV5-10-1A0A0J9YXX1 117 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 PIAS1O75925 651 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 RPN2P04844 631 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 THRAP10827 490 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 LIMK2P53671 638 aa19.75■□□□□ 0.75
PTCD3-202ENST00000409326 TIAL1Q01085 375 aaKnown RBP eCLIP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms