RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 PCDHGA11Q9Y5H2 935 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 XRCC1P18887 633 aaPredicted RBP18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ACVRL1P37023 503 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 EEFSECP57772 596 aaKnown RBP18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MPP2Q14168 576 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 FAM92BQ6ZTR7 304 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 EXD2Q9NVH0 621 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 RUVBL1Q9Y265 456 aaKnown RBP18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 NUP98P52948 1817 aa18.42■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MCIDASD6RGH6 385 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 DLDP09622 509 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PTPN2P17706 415 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MYL9P24844 172 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TAS2R41P59536 307 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 KLHL12Q53G59 568 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ZNF697Q5TEC3 545 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 KLHL35Q6PF15 583 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CXXC5Q7LFL8 322 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 NANOGNBQ7Z5D8 188 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MTPNP58546 118 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CLDN10P78369 228 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM63BQ5T3F8 832 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 RBM20Q5T481 1227 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CDH24Q86UP0 819 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CPA6Q8N4T0 437 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 HM13Q8TCT9 377 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 SMG7Q92540 1137 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PSAT1Q9Y617 370 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 NAV1Q8NEY1 1877 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3DA0A087WVF3 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3IA0A087WXS9 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3EA0A087X179 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3KA0A087X1G2 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3FA6NER0 549 aaPredicted RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3LB9A6J9 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3HP0C7X1 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 C9orf64Q5T6V5 341 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3GQ6DHY5 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3CQ6IPX1 549 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TBC1D3Q8IZP1 549 aaPredicted RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 EBPLQ9BY08 206 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ASB3Q9Y575 518 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM233B4DJY2 109 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 COL6A1P12109 1028 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 DPY19L1Q2PZI1 675 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 FAM124AQ86V42 546 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ZNF354BQ96LW1 612 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 WRAP53Q9BUR4 548 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 GKN1Q9NS71 199 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CYTH4Q9UIA0 394 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CNOT6Q9ULM6 557 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ADAMDEC1O15204 470 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CAP1Q01518 475 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM214Q6NUQ4 689 aaKnown RBP18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PIK3C3Q8NEB9 887 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TOP1MTQ969P6 601 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM138Q9NPI0 162 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PPM1HQ9ULR3 514 aa18.41■□□□□ 0.54
CNTNAP3B-203ENST00000377561 IGKV6D-21A0A0A0MT36 114 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 IRGMA1A4Y4 181 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PHTF2Q8N3S3 785 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 C2orf73Q8N5S3 287 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MCFD2Q8NI22 146 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PIGUQ9H490 435 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CXorf21Q9HAI6 301 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ABCB8Q9NUT2 735 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 RAPGEFL1Q9UHV5 662 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MAP4K5Q9Y4K4 846 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 C8AP07357 584 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 SATL1Q86VE3 508 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 RAD51AP1Q96B01 352 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 LRRC58Q96CX6 371 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM248Q9NWD8 314 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MBD2Q9UBB5 411 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 DNAJB9Q9UBS3 223 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TAF4O00268 1085 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 IFNW1P05000 195 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 APODP05090 189 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PSMD8P48556 350 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MS4A13Q5J8X5 152 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 LDLRAP1Q5SW96 308 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM220Q6QAJ8 160 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 DNAJB7Q7Z6W7 309 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 HID1Q8IV36 788 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 VANGL1Q8TAA9 524 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TMEM175Q9BSA9 504 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 TRPS1Q9UHF7 1281 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 MKL2Q9ULH7 1088 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 IGKV6-21A0A0C4DH24 114 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PAPSS2O95340 614 aaPredicted RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 H6PDO95479 791 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 IDSP22304 550 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CTU1Q7Z7A3 348 aaKnown RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 SRFBP1Q8NEF9 429 aaKnown RBP18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 AP3S1Q92572 193 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 CIDEBQ9UHD4 219 aa18.4■□□□□ 0.54
CNTNAP3B-203ENST00000377561 PLK4O00444 970 aa18.39■□□□□ 0.54
CNTNAP3B-203ENST00000377561 ENPP3O14638 875 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms