RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CFHP08603 1231 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 RPIAP49247 311 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FAM46CQ5VWP2 391 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF248Q8NDW4 579 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 SLC9A6Q92581 669 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NTAN1Q96AB6 310 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 LMAN2LQ9H0V9 348 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 C1orf21Q9H246 121 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NKX1-2Q9UD57 310 aaPredicted RBP14□□□□□ -0.17
LMX1B-202ENST00000373474 ALG5Q9Y673 324 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 A0A1W2PQ67 120 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FAM234BA2RU67 622 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PRH1P02810 166 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 RAP2AP10114 183 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PDHA2P29803 388 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 HERVK_113P63132 956 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 RFTN2Q52LD8 501 aaPredicted RBP14□□□□□ -0.17
LMX1B-202ENST00000373474 C17orf64Q86WR6 236 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FBXL18Q96ME1 805 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 AIF1LQ9BQI0 150 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 ERVK-6Q9BXR3 956 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 SLC17A6Q9P2U8 582 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 ARFGEF2Q9Y6D5 1785 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NEDD8-MDP1E9PL57 170 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 SLC22A1O15245 554 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PRPS2P11908 318 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 IMPDH1P20839 514 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PTX3P26022 381 aaPredicted RBP14□□□□□ -0.17
LMX1B-202ENST00000373474 GABRR2P28476 465 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 CCR10P46092 362 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 CEBPGP53567 150 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 TAS2R39P59534 338 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 CYP4F8P98187 520 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 AKAP1Q92667 903 aaKnown RBP eCLIP14□□□□□ -0.17
LMX1B-202ENST00000373474 DMRTB1Q96MA1 342 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 MGME1Q9BQP7 344 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NECTIN3Q9NQS3 549 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NALCNQ8IZF0 1738 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FADS2P1A8MWK0 482 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 CCRL2O00421 344 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PER2O15055 1255 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 DNTTP04053 509 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FKBP1BP68106 108 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 TCEAL1Q15170 157 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 FBXO48Q5FWF7 155 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 SERPINA9Q86WD7 417 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 OR10A6Q8NH74 314 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 DNAJB8Q8NHS0 232 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 DNAJA4Q8WW22 397 aaPredicted RBP14□□□□□ -0.17
LMX1B-202ENST00000373474 PSMG2Q969U7 264 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 PLD4Q96BZ4 506 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 ASB9Q96DX5 294 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 GFM1Q96RP9 751 aaKnown RBP14□□□□□ -0.17
LMX1B-202ENST00000373474 PADI3Q9ULW8 664 aa14□□□□□ -0.17
LMX1B-202ENST00000373474 NT5C1B-RDH14C9J2C7 533 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SYN3O14994 580 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ESR1P03372 595 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ASLP04424 464 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SMPD1P17405 629 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 PTGER3P43115 390 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 PLEKHG4Q58EX7 1191 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 LAPTM4BQ86VI4 370 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 CIR1Q86X95 450 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ATAD1Q8NBU5 361 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 LSM14AQ8ND56 463 aaKnown RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 HAPLN3Q96S86 360 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 LPIN3Q9BQK8 851 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 TPK1Q9H3S4 243 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ANKRA2Q9H9E1 313 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF214Q9UL59 606 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 KCPQ6ZWJ8 1503 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 FABP12A6NFH5 140 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF99A8MXY4 864 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SLC25A12O75746 678 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 KDM4BO94953 1096 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 CTSEP14091 401 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 MAGEA12P43365 314 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SLC18A2Q05940 514 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 GLB1L3Q8NCI6 653 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ANXA4P09525 319 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 C2orf80Q0P641 193 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 RNASE12Q5GAN4 147 aaKnown RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 EIF5AL1Q6IS14 154 aaKnown RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 AHSA2Q719I0 299 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SLC24A5Q71RS6 500 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 OR5K1Q8NHB7 308 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 IPCEF1Q8WWN9 437 aaPredicted RBP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 DNAJB9Q9UBS3 223 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 OR2AT4A6NND4 320 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ISM1B1AKI9 464 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ADAMDEC1O15204 470 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 RLN2P04090 185 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 SMU1Q2TAY7 513 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 PLA2G4EQ3MJ16 856 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 PITRM1Q5JRX3 1037 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ADNP2Q6IQ32 1131 aa13.99□□□□□ -0.17
LMX1B-202ENST00000373474 ATCAYQ86WG3 371 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms