RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 ADAMTSL2Q86TH1 951 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 TBC1D19Q8N5T2 526 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 PLA2G15Q8NCC3 412 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 OR2I1PQ8NGU4 316 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 PGM2Q96G03 612 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 FAR2Q96K12 515 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 OLFM1Q99784 485 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 AARSD1Q9BTE6 412 aaKnown RBP5.36□□□□□ -1.55
VPS13C-209ENST00000560637 TMEM120AQ9BXJ8 343 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 SRMSQ9H3Y6 488 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 IPPKQ9H8X2 491 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 EIF2B3Q9NR50 452 aaKnown RBP5.36□□□□□ -1.55
VPS13C-209ENST00000560637 IL17CQ9P0M4 197 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 GALPQ9UBC7 116 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 TAC3Q9UHF0 121 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 PLEKHM1Q9Y4G2 1056 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 KCNE2Q9Y6J6 123 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 WASF2Q9Y6W5 498 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 SPTBP11277 2137 aa5.36□□□□□ -1.55
VPS13C-209ENST00000560637 KANSL1LA0AUZ9 987 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MAP2K7O14733 419 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ANGPT2O15123 496 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ZW10O43264 779 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 STK16O75716 305 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CYP7B1O75881 506 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 SERPINE1P05121 402 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TNNI3P19429 210 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ATP5F1P24539 256 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ECHS1P30084 290 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 LTBRP36941 435 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 SKIV2L2P42285 1042 aaKnown RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TPMTP51580 245 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CASP9P55211 416 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CDKN2DP55273 166 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ACSM2AQ08AH3 577 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TERF2Q15554 542 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TEAD4Q15561 434 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 DEFB110Q30KQ9 67 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MINDY4Q4G0A6 757 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ARL13AQ5H913 290 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MANEALQ5VSG8 457 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ACSM2BQ68CK6 577 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 LPCAT2Q7L5N7 544 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 UBE2Q1Q7Z7E8 422 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 HORMAD1Q86X24 394 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 OR56A4Q8NGH8 313 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 APOLD1Q96LR9 279 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 GATA5Q9BWX5 397 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 RBCK1Q9BYM8 510 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MAGEE1Q9HCI5 957 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PRDM8Q9NQV8 689 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 FAM86C1Q9NVL1 165 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 STOX2Q9P2F5 926 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 HS3ST2Q9Y278 367 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 R4GN57 208 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ZNF860A6NHJ4 632 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 OR1F1O43749 312 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 GSRP00390 522 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 IGLV3-27P01718 113 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CTSLP07711 333 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PDHA2P29803 388 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TPD52P55327 224 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PPP2CBP62714 309 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PPP2CAP67775 309 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 HMGCS1Q01581 520 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CHIT1Q13231 466 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 TBCCQ15814 346 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ADGRD1Q6QNK2 874 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ZNF783Q6ZMS7 281 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 Q6ZNB5 142 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 C17orf64Q86WR6 236 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ZSWIM9Q86XI8 627 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 KCT2Q8NC54 265 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PIH1D2Q8WWB5 315 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PATE1Q8WXA2 126 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 INPP5DQ92835 1189 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 HIC2Q96JB3 615 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 SEC16BQ96JE7 1060 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 KCNA7Q96RP8 456 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 KIFC1Q9BW19 673 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 EBPLQ9BY08 206 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 LRRC3Q9BY71 257 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CAAP1Q9H8G2 361 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 CACYBPQ9HB71 228 aaKnown RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MIEF1Q9NQG6 463 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 MBNL1Q9NR56 388 aaKnown RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 IL37Q9NZH6 218 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 L3MBTL1Q9Y468 752 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PRSS21Q9Y6M0 314 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 SHROOM3Q8TF72 1996 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 LOXHD1Q8IVV2 1947 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 IGLV3-10A0A075B6K4 115 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ZCWPW2A0A1B0GU75 182 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 A0A1B0GVT2 93 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 A6NNZ2 444 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 KDM1AO60341 852 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ULK1O75385 1050 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 ECI2O75521 394 aa5.35□□□□□ -1.55
VPS13C-209ENST00000560637 PENKP01210 267 aaPredicted RBP5.35□□□□□ -1.55
VPS13C-209ENST00000560637 EPOP01588 193 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms