RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 GSTM1P09488 218 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 F3P13726 295 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 ELK3P41970 407 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 PLTPP55058 493 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 GSTM4Q03013 218 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 PDIA2Q13087 525 aaKnown RBP15.71■□□□□ 0.11
RAB40C-208ENST00000564703 KIR2DS5Q14953 304 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 HP1BP3Q5SSJ5 553 aaPredicted RBP15.71■□□□□ 0.11
RAB40C-208ENST00000564703 GUSBP11Q6P575 273 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 PACS1Q6VY07 963 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 C11orf96Q7Z7L8 435 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 LMNTD2Q8IXW0 634 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 CFAP206Q8IYR0 622 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 NAGSQ8N159 534 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 ARL14Q8N4G2 192 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 CLDN19Q8N6F1 224 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 SH3KBP1Q96B97 665 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 LINC00615Q96LM1 132 aaPredicted RBP15.71■□□□□ 0.11
RAB40C-208ENST00000564703 FCRL3Q96P31 734 aaPredicted RBP15.71■□□□□ 0.11
RAB40C-208ENST00000564703 PRDM8Q9NQV8 689 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 ZC3H7BQ9UGR2 993 aaKnown RBP15.71■□□□□ 0.11
RAB40C-208ENST00000564703 ACSL5Q9ULC5 683 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 VPS9D1Q9Y2B5 631 aa15.71■□□□□ 0.11
RAB40C-208ENST00000564703 ZFC3H1O60293 1989 aaKnown RBP15.71■□□□□ 0.1
RAB40C-208ENST00000564703 GOLGA8KD6RF30 607 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 GOLGA8TH3BQL2 631 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 NUDT21O43809 227 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 RPL10P27635 214 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 ARCN1P48444 511 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 PPM1FP49593 454 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 PRLHRP49683 370 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 GUCY2DQ02846 1103 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 DMPKQ09013 629 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 FOXC1Q12948 553 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 HLTFQ14527 1009 aaKnown RBP eCLIP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 SEPT7Q16181 437 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 MSS51Q4VC12 460 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 SPANXN3Q5MJ09 141 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 RNF187Q5TA31 235 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 PTRHD1Q6GMV3 140 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 ABRAXAS1Q6UWZ7 409 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 DHRS13Q6UX07 377 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 WASH2PQ6VEQ5 465 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 LDB1Q86U70 411 aaPredicted RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 LRRC6Q86X45 466 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 TRIM48Q8IWZ4 208 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 GPR150Q8NGU9 434 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 NAT14Q8WUY8 206 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 ADAMTS14Q8WXS8 1223 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 ART4Q93070 314 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 PWWP2AQ96N64 755 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 CARD6Q9BX69 1037 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 PPANQ9NQ55 473 aaKnown RBP15.7■□□□□ 0.1
RAB40C-208ENST00000564703 WASH6PQ9NQA3 447 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 TOR4AQ9NXH8 423 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 FAM8A1Q9UBU6 413 aa15.7■□□□□ 0.1
RAB40C-208ENST00000564703 LY6G6EA0A0G2JKS1 128 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 ZCWPW2A0A1B0GU75 182 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 UBA6A0AVT1 1052 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 PRMT5O14744 637 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 OR1I1O60431 355 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 BANF1O75531 89 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 VIPP01282 170 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 PNLIPP16233 465 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 OGNP20774 298 aaKnown RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 MAZP56270 477 aaKnown RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 NFE2L1Q14494 772 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 SEMA3AQ14563 771 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 AGAP9Q5VTM2 703 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 METRNLQ641Q3 311 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 MICALCLQ6ZW33 695 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 PALM2Q8IXS6 379 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 AGGF1Q8N302 714 aaeCLIP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 GALNT15Q8N3T1 639 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 SFRP1Q8N474 314 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 WDR48Q8TAF3 677 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 HM13Q8TCT9 377 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 PYROXD1Q8WU10 500 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 CXorf40BQ96DE9 158 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 CFAP36Q96G28 342 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 TRIM56Q9BRZ2 755 aaKnown RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 FAM167BQ9BTA0 163 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 EPB41L5Q9HCM4 733 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 FAM114A2Q9NRY5 505 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 MARCH4Q9P2E8 410 aaPredicted RBP15.69■□□□□ 0.1
RAB40C-208ENST00000564703 CHMP2BQ9UQN3 213 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 RNF215Q9Y6U7 377 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 U3KQA8 63 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 DMXL1Q9Y485 3027 aa15.69■□□□□ 0.1
RAB40C-208ENST00000564703 ESPNB1AK53 854 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 EIF3HO15372 352 aaKnown RBP eCLIP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 OPA1O60313 960 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 SLC35G4P0C7Q5 338 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 JUPP14923 745 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 XRCC1P18887 633 aaPredicted RBP15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ARNTP27540 789 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 ALDH4A1P30038 563 aa15.68■□□□□ 0.1
RAB40C-208ENST00000564703 PLOD1Q02809 727 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms