RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 POT1Q9NUX5 634 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 ZDHHC3Q9NYG2 299 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
SMAD3-213ENST00000560175 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 HEATR9A2RTY3 570 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 OR2AG2A6NM03 316 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CES2O00748 559 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 RRP8O43159 456 aaKnown RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 C9P02748 559 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ATP1B2P14415 290 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ADRA1DP25100 572 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ACRV1P26436 265 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 RPL10P27635 214 aaKnown RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 MAGEA6P43360 314 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 KCNJ1P48048 391 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 PRLHRP49683 370 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CDKN1CP49918 316 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ARSDP51689 593 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 TMPRSS15P98073 1019 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CDK16Q00536 496 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CACNG1Q06432 222 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 BIRC2Q13490 618 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 PLA2G4EQ3MJ16 856 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 MAP9Q49MG5 647 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 SERPINA9Q86WD7 417 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ZNF761Q86XN6 746 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 TAB3Q8N5C8 712 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CCDC89Q8N998 374 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 OR10G6Q8NH81 332 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ZFPM2Q8WW38 1151 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 CCDC97Q96F63 343 aaPredicted RBP12.96□□□□□ -0.33
SMAD3-213ENST00000560175 COPS8Q99627 209 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 RAB33BQ9H082 229 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 OSGEPL1Q9H4B0 414 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 ACSL5Q9ULC5 683 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 DNAJC16Q9Y2G8 782 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 NEU2Q9Y3R4 380 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 LOXL2Q9Y4K0 774 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 SLC30A1Q9Y6M5 507 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 LOC400499M0QZD8 3231 aa12.96□□□□□ -0.33
SMAD3-213ENST00000560175 MN1Q10571 1320 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 CCL22O00626 93 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 DUX1O43812 170 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 VIPP01282 170 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 APRTP07741 180 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 RALBP11234 206 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 FGF3P11487 239 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 ITPKBP27987 946 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 SLC5A2P31639 672 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 FOXN2P32314 431 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 ETV5P41161 510 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 DRG2P55039 364 aaKnown RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 TLE3Q04726 772 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 NFE2L1Q14494 772 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 ITIH4Q14624 930 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 RPE65Q16518 533 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 COL28A1Q2UY09 1125 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 FNBP1LQ5T0N5 605 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 TSTD2Q5T7W7 516 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 CAPRIN2Q6IMN6 1127 aaKnown RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 NLRP9Q7RTR0 991 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 SPACA3Q8IXA5 215 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 SLC35F6Q8N357 371 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 BEND7Q8N7W2 519 aaPredicted RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 BMPERQ8N8U9 685 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 DNAAF3Q8N9W5 541 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 ACTRT1Q8TDG2 376 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 SNRNP27Q8WVK2 155 aaKnown RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 CCDC74BQ96LY2 380 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 ZNF778Q96MU6 729 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 TBC1D10AQ9BXI6 508 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 FAM96AQ9H5X1 160 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 PRORYQ9H606 182 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 PIH1D1Q9NWS0 290 aaKnown RBP12.95□□□□□ -0.34
SMAD3-213ENST00000560175 TMEM9Q9P0T7 183 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 SEMA5BQ9P283 1151 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 EPHA6Q9UF33 1036 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 CRLS1Q9UJA2 301 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 PCDHGA3Q9Y5H0 932 aa12.95□□□□□ -0.34
SMAD3-213ENST00000560175 MGAQ8IWI9 3026 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 PRAMEF33A0A0G2JMD5 474 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 OR52A4PA6NMU1 304 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 PDZK1P1A8MUH7 402 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 E7EVH7 732 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 AP3B1O00203 1094 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 TOX3O15405 576 aaPredicted RBP12.94□□□□□ -0.34
SMAD3-213ENST00000560175 GSTM1P09488 218 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 ANKRD34CP0C6C1 535 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 PRSS56P0CW18 603 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 HGFP14210 728 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 ITIH1P19827 911 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 TPSB2P20231 275 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 MSNP26038 577 aaKnown RBP12.94□□□□□ -0.34
SMAD3-213ENST00000560175 AKT1P31749 480 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 NPY2RP49146 381 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 GSTM4Q03013 218 aa12.94□□□□□ -0.34
SMAD3-213ENST00000560175 TPSAB1Q15661 275 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms