RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 MFRPQ9BY79 579 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 CBX8Q9HC52 389 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 CASS4Q9NQ75 786 aa25.38■■□□□ 1.65
PVT1-219ENST00000523427 NFKBIL1Q9UBC1 381 aaPredicted RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 CFAP20Q9Y6A4 193 aaKnown RBP25.38■■□□□ 1.65
PVT1-219ENST00000523427 UBA6A0AVT1 1052 aaPredicted RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 LRRD1A4D1F6 860 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 POP7O75817 140 aaKnown RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 PBLDP30039 288 aaPredicted RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 GPR19Q15760 415 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 RPE65Q16518 533 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 PRR30Q53SZ7 412 aaPredicted RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 KLHL35Q6PF15 583 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 SYVN1Q86TM6 617 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 AMZ2Q86W34 360 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 TMEM126BQ8IUX1 230 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 PLD5Q8N7P1 536 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 SEC14L1Q92503 715 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 ZNF514Q96K75 400 aaPredicted RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 BPIFA3Q9BQP9 254 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 RAB33BQ9H082 229 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 SLC25A51Q9H1U9 297 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 IMP3Q9NV31 184 aaKnown RBP25.37■■□□□ 1.65
PVT1-219ENST00000523427 MAP4K5Q9Y4K4 846 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 ESPL1Q14674 2120 aa25.37■■□□□ 1.65
PVT1-219ENST00000523427 SCRG1O75711 98 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 PTGIRP43119 386 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 NOMO1Q15155 1222 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 EIF2S3LQ2VIR3 472 aaKnown RBP25.36■■□□□ 1.65
PVT1-219ENST00000523427 FIGNQ5HY92 759 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 FAM83HQ6ZRV2 1179 aaPredicted RBP25.36■■□□□ 1.65
PVT1-219ENST00000523427 FCRL4Q96PJ5 515 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 VPS35Q96QK1 796 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 HRASLS2Q9NWW9 162 aa25.36■■□□□ 1.65
PVT1-219ENST00000523427 GOLGA6L22H0YM25 854 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 GPR39O43194 453 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A9O60656 530 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 NDST3O95803 873 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A6P19224 532 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A1P22309 533 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A4P22310 534 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 ARCN1P48444 511 aaKnown RBP25.35■■□□□ 1.65
PVT1-219ENST00000523427 CTSCP53634 463 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 GPS2Q13227 327 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 NFE2L1Q14494 772 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 FAM69BQ5VUD6 431 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 FBXO38Q6PIJ6 1188 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 MAK16Q9BXY0 300 aaKnown RBP25.35■■□□□ 1.65
PVT1-219ENST00000523427 CHST8Q9H2A9 424 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A7Q9HAW7 530 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A10Q9HAW8 530 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 UGT1A8Q9HAW9 530 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 FAM8A1Q9UBU6 413 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 PRRC2CQ9Y520 2896 aaKnown RBP25.35■■□□□ 1.65
PVT1-219ENST00000523427 MED13Q9UHV7 2174 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 CREBBPQ92793 2442 aa25.35■■□□□ 1.65
PVT1-219ENST00000523427 A6NL46 340 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 OR2AG2A6NM03 316 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 CPNE3O75131 537 aaKnown RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 DYNLT1P63172 113 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 HSD11B2P80365 405 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 MRPL49Q13405 166 aaKnown RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 XRCC4Q13426 336 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 MESDQ14696 234 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 INPP5JQ15735 1006 aaPredicted RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 PRAMEF17Q5VTA0 474 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 DUS1LQ6P1R4 473 aaKnown RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 TMEM220Q6QAJ8 160 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 BPHLQ86WA6 291 aaPredicted RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 RASGEF1AQ8N9B8 481 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 SYN2Q92777 582 aaPredicted RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 PACSIN1Q9BY11 444 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 GLOD4Q9HC38 313 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 SOHLH2Q9NX45 425 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 SEMA5BQ9P283 1151 aa25.34■■□□□ 1.65
PVT1-219ENST00000523427 PCDHGA9Q9Y5G4 932 aaKnown RBP25.34■■□□□ 1.65
PVT1-219ENST00000523427 F5H423 210 aaPredicted RBP25.33■■□□□ 1.65
PVT1-219ENST00000523427 APOL1O14791 398 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 BUD23O43709 281 aaKnown RBP25.33■■□□□ 1.65
PVT1-219ENST00000523427 PDK1Q15118 436 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 CHRNA6Q15825 494 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 PPP2R5EQ16537 467 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 ARMC6Q6NXE6 501 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 FAM151BQ6UXP7 276 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 SLC25A41Q8N5S1 370 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 PRR7Q8TB68 274 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 BRSK1Q8TDC3 778 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 PPM1MQ96MI6 270 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 IL26Q9NPH9 171 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 SLAMF7Q9NQ25 335 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 KCND1Q9NSA2 647 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 TMEM63CQ9P1W3 806 aa25.33■■□□□ 1.65
PVT1-219ENST00000523427 A0A1W2PQJ5 194 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 TLCD2A6NGC4 264 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 ZNF185O15231 689 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 SORBS2O94875 1100 aaKnown RBP25.32■■□□□ 1.64
PVT1-219ENST00000523427 KLK3P07288 261 aaPredicted RBP25.32■■□□□ 1.64
PVT1-219ENST00000523427 CA5AP35218 305 aa25.32■■□□□ 1.64
PVT1-219ENST00000523427 ZBED6P86452 979 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms