RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FAM171A1Q5VUB5 890 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 STEAP3Q658P3 488 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 C18orf63Q68DL7 685 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TTC27Q6P3X3 843 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RFWD3Q6PCD5 774 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 KLHL17Q6TDP4 642 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 VITQ6UXI7 678 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 IL20RBQ6UXL0 311 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GPRIN3Q6ZVF9 776 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CYP4V2Q6ZWL3 525 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 BZW1Q7L1Q6 419 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 LRRC70Q7Z2Q7 622 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ERICH1Q86X53 443 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PALB2Q86YC2 1186 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF573Q86YE8 665 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MISPQ8IVT2 679 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ARID3BQ8IVW6 561 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 DCP1BQ8IZD4 617 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ADGRF2Q8IZF7 708 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 OFCC1Q8IZS5 231 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GHDCQ8N2G8 530 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GPR137CQ8N3F9 429 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 OR52E1Q8NGJ3 308 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NFKBIDQ8NI38 313 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ST7LQ8TDW4 575 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TAS1R2Q8TE23 839 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SETD7Q8WTS6 366 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RIN2Q8WYP3 895 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SMG7Q92540 1137 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MRPS27Q92552 414 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 LARP4BQ92615 738 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 BCL2L2Q92843 193 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 APBB2Q92870 758 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 COPS5Q92905 334 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RFT1Q96AA3 541 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NTAN1Q96AB6 310 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC127Q96BQ5 260 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF707Q96C28 371 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 EEF2KMTQ96G04 330 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MRGPRX3Q96LB0 322 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 LURAP1Q96LR2 239 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 C12orf66Q96MD2 445 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ZSWIM3Q96MP5 696 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FOXN4Q96NZ1 517 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF317Q96PQ6 595 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CCNL2Q96S94 520 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FUZQ9BT04 418 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 LRRC1Q9BTT6 524 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CHID1Q9BWS9 393 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SPATA16Q9BXB7 569 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TLR10Q9BXR5 811 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 IDI2Q9BXS1 227 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GLIS2Q9BZE0 524 aaPredicted RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 UBXN6Q9BZV1 441 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PKIBQ9C010 78 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 QRSL1Q9H0R6 528 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 VCX2Q9H322 139 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PABPC3Q9H361 631 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 POFUT1Q9H488 388 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ECT2Q9H8V3 914 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SP140LQ9H930 580 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 SLC39A2Q9NP94 309 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NECTIN3Q9NQS3 549 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ARHGEF3Q9NR81 526 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TLR8Q9NR97 1041 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 C19orf12Q9NSK7 152 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 MAN2C1Q9NTJ4 1040 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 INTS9Q9NV88 658 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ETNK2Q9NVF9 386 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 NKIRAS1Q9NYS0 192 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 ERVK-18Q9QC07 812 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GULP1Q9UBP9 304 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CYB5R1Q9UHQ9 305 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 GGA2Q9UJY4 613 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 FZD10Q9ULW2 581 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 RNF24Q9Y225 148 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 EIF3LQ9Y262 564 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 TDRKHQ9Y2W6 561 aaKnown RBP3.6□□□□□ -1.83
SF3B1-203ENST00000414174 IFT52Q9Y366 437 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 EMC9Q9Y3B6 208 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 DUSP10Q9Y6W6 482 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 PTPRCP08575 1304 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 CCNB3Q8WWL7 1395 aa3.6□□□□□ -1.83
SF3B1-203ENST00000414174 A0A087WZY1 265 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 C7orf72A4D263 438 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MTMR11A4FU01 709 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 FAM149AA5PLN7 773 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 BTBD17A6NE02 478 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 LRRC53A6NM62 1247 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 TMEM114B3SHH9 223 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 GRM8O00222 908 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MATN2O00339 956 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 PLK4O00444 970 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NR5A2O00482 541 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 NOP56O00567 594 aaKnown RBP3.59□□□□□ -1.83
SF3B1-203ENST00000414174 MDM4O15151 490 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 SEPT4O43236 478 aa3.59□□□□□ -1.83
SF3B1-203ENST00000414174 TGFB1I1O43294 461 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms