RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 UBA6A0AVT1 1052 aaPredicted RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 RHOBTB1O94844 696 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SLC34A2O95436 690 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SLC4A1P02730 911 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 FMO4P31512 558 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 DRD3P35462 400 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 POLR2LP62875 67 aaKnown RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CNTN1Q12860 1018 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 ERN2Q76MJ5 926 aaKnown RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SNX20Q7Z614 316 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 PARP9Q8IXQ6 854 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 HDDC3Q8N4P3 179 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 NKAPQ8N5F7 415 aaKnown RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CD200R1Q8TD46 325 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 TPSD1Q9BZJ3 242 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 UNKQ9C0B0 810 aaKnown RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 GSTO2Q9H4Y5 243 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 DKK3Q9UBP4 350 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 TAGLN3Q9UI15 199 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SCML1Q9UN30 329 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 NUMA1Q14980 2115 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 C1orf232A0A0U1RR37 186 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 TSPAN11A1L157 253 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SLC22A2O15244 555 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 LAMTOR5O43504 91 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 KLK8O60259 260 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 VPS26AO75436 327 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 ESRRAP11474 423 aaPredicted RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 ADRB3P13945 408 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 P2RY2P41231 377 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CCR10P46092 362 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 HERVK_113P63132 956 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 NFATC2Q13469 925 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 OR4D1Q15615 310 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 GPR33Q49SQ1 333 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SLC9B1Q4ZJI4 515 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 ZRANB3Q5FWF4 1079 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 VWA5B1Q5TIE3 1220 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 TSSK4Q6SA08 328 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 PAQR3Q6TCH7 311 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 MAMSTRQ6ZN01 415 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SPNS2Q8IVW8 549 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 C1orf210Q8IVY1 113 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CAMKK1Q8N5S9 505 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SGF29Q96ES7 293 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 PDLIM5Q96HC4 596 aaKnown RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 FAR2Q96K12 515 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CCDC28BQ9BUN5 200 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 ERVK-6Q9BXR3 956 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 C1orf21Q9H246 121 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 MMADHCQ9H3L0 296 aaPredicted RBP14.92□□□□□ -0.02
SCAF11-204ENST00000395454 IL26Q9NPH9 171 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 CD93Q9NPY3 652 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 SLC30A1Q9Y6M5 507 aa14.92□□□□□ -0.02
SCAF11-204ENST00000395454 A0A0U1RQS6 177 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 NPIPB15A6NHN6 443 aaPredicted RBP14.91□□□□□ -0.02
SCAF11-204ENST00000395454 PRR5-ARHGAP8B1AHC4 643 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 PRMT5O14744 637 aaPredicted RBP14.91□□□□□ -0.02
SCAF11-204ENST00000395454 OR1I1O60431 355 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 DIAPH2O60879 1101 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 WFS1O76024 890 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 PRAMEF1O95521 474 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 TPBGLP0DKB5 382 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 BPIP17213 487 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 HNRNPH1P31943 449 aaKnown RBP14.91□□□□□ -0.02
SCAF11-204ENST00000395454 TPMTP51580 245 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 CLCN7P51798 805 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 ALDH18A1P54886 795 aaKnown RBP14.91□□□□□ -0.02
SCAF11-204ENST00000395454 NAA20P61599 178 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 ARHGAP8P85298 464 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 SEMG2Q02383 582 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 CFAP157Q5JU67 520 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 ZNF678Q5SXM1 525 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 LYPLAL1Q5VWZ2 237 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 FAM124AQ86V42 546 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 GIMAP7Q8NHV1 300 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 STAG3L4Q8TBR4 150 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 HCAR2Q8TDS4 363 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 MOCOSQ96EN8 888 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 GPR21Q99679 349 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 C1QTNF3Q9BXJ4 246 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 HDAC8Q9BY41 377 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 ZNF385DQ9H6B1 395 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 EML4Q9HC35 981 aaKnown RBP14.91□□□□□ -0.02
SCAF11-204ENST00000395454 C11orf16Q9NQ32 467 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 TCF7L2Q9NQB0 619 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 TAS2R1Q9NYW7 299 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 DNAH14Q0VDD8 3507 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 PIKFYVEQ9Y2I7 2098 aa14.91□□□□□ -0.02
SCAF11-204ENST00000395454 PLXNA2O75051 1894 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 A8MX80 341 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 UPK3BL1B0FP48 263 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 UPK3BL2E5RIL1 263 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 K7ESF4 209 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 SMIM24O75264 130 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 TIMP2P16035 220 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 PRDX6P30041 224 aa14.9□□□□□ -0.02
SCAF11-204ENST00000395454 PPARGP37231 505 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms