RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 AMZ1Q400G9 498 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 BCL7AQ4VC05 210 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 WDR74Q6RFH5 385 aaPredicted RBP19.56■□□□□ 0.72
SFXN1-209ENST00000508290 PPP1R21Q6ZMI0 780 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 NLRP9Q7RTR0 991 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 B3GNT8Q7Z7M8 397 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 CLEC14AQ86T13 490 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 TRIM48Q8IWZ4 208 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 NXPE1Q8N323 547 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 RASGEF1AQ8N9B8 481 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 COPS8Q99627 209 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 ETNK1Q9HBU6 452 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 SLC23A2Q9UGH3 650 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 RIMKLBQ9ULI2 386 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 ATXN7L1Q9ULK2 861 aaPredicted RBP19.56■□□□□ 0.72
SFXN1-209ENST00000508290 TTC7AQ9ULT0 858 aaPredicted RBP19.56■□□□□ 0.72
SFXN1-209ENST00000508290 MYLKQ15746 1914 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 COL27A1Q8IZC6 1860 aaPredicted RBP19.56■□□□□ 0.72
SFXN1-209ENST00000508290 ACACAQ13085 2346 aa19.56■□□□□ 0.72
SFXN1-209ENST00000508290 HEATR9A2RTY3 570 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 MROH6A6NGR9 719 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 KIF5CO60282 957 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 EML2O95834 649 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 VIPP01282 170 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 GSTM1P09488 218 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 JMJD7P0C870 316 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 LIMK2P53671 638 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 RP1P56715 2156 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 UBE2IP63279 158 aaKnown RBP19.55■□□□□ 0.72
SFXN1-209ENST00000508290 GSTM4Q03013 218 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 PTPRCAPQ14761 206 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 POU6F1Q14863 301 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 PHF19Q5T6S3 580 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 TMEM71Q6P5X7 295 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 GSTA5Q7RTV2 222 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 PKD1L2Q7Z442 2459 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 WDFY3Q8IZQ1 3526 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 OR13C4Q8NGS5 318 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 PRR11Q96HE9 360 aaPredicted RBP19.55■□□□□ 0.72
SFXN1-209ENST00000508290 LINC00615Q96LM1 132 aaPredicted RBP19.55■□□□□ 0.72
SFXN1-209ENST00000508290 RANBP9Q96S59 729 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 DPH1Q9BZG8 443 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 FOXP3Q9BZS1 431 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 VPS37BQ9H9H4 285 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 PRDM8Q9NQV8 689 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 DNAJC16Q9Y2G8 782 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 KCTD3Q9Y597 815 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 DMXL2Q8TDJ6 3036 aa19.55■□□□□ 0.72
SFXN1-209ENST00000508290 CDRT15L2A8MXV6 281 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 TLX3O43711 291 aaPredicted RBP19.54■□□□□ 0.72
SFXN1-209ENST00000508290 POP7O75817 140 aaKnown RBP19.54■□□□□ 0.72
SFXN1-209ENST00000508290 TNFSF15O95150 251 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 APRTP07741 180 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 MC4RP32245 332 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 CDK16Q00536 496 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 CACNG1Q06432 222 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 SEPT6Q14141 434 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 PLA2G4EQ3MJ16 856 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 TMEM220Q6QAJ8 160 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 RASGEF1CQ8N431 466 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 DNAJC1Q96KC8 554 aaKnown RBP19.54■□□□□ 0.72
SFXN1-209ENST00000508290 ZMYND15Q9H091 742 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 RDH14Q9HBH5 336 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 ZDHHC3Q9NYG2 299 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 PDP2Q9P2J9 529 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 ACSL6Q9UKU0 697 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 ACSL5Q9ULC5 683 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 LOXL2Q9Y4K0 774 aa19.54■□□□□ 0.72
SFXN1-209ENST00000508290 ZNF106Q9H2Y7 1883 aaKnown RBP19.54■□□□□ 0.72
SFXN1-209ENST00000508290 IGLV3-16A0A075B6K0 115 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TRBV5-4A0A0C4DH59 114 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 A0A1W2PNU3 283 aaPredicted RBP19.53■□□□□ 0.72
SFXN1-209ENST00000508290 MGAT4DA6NG13 374 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 F8W8V4 182 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 QSOX1O00391 747 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 CES2O00748 559 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TPH1P17752 444 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 ADRA1DP25100 572 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 ABCG1P45844 678 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 CTSCP53634 463 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 UCNP55089 124 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 FNBP1LQ5T0N5 605 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TMEM164Q5U3C3 297 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 ARMC3Q5W041 872 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 USP53Q70EK8 1073 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 AGBL5Q8NDL9 886 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 OR52K1Q8NGK4 314 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 OR2L2Q8NH16 312 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.53■□□□□ 0.72
SFXN1-209ENST00000508290 CXorf40BQ96DE9 158 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 CDKN2AIPNLQ96HQ2 116 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TTC1Q99614 292 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 NUDT22Q9BRQ3 303 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 CASS4Q9NQ75 786 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 ARHGEF17Q96PE2 2063 aaPredicted RBP19.53■□□□□ 0.72
SFXN1-209ENST00000508290 ZZEF1O43149 2961 aa19.53■□□□□ 0.72
SFXN1-209ENST00000508290 TRBV23OR9-2A0A075B6M9 112 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 IGHV5-10-1A0A0J9YXX1 117 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 C17orf113A0A1B0GUU1 675 aa19.52■□□□□ 0.72
SFXN1-209ENST00000508290 OR2AG2A6NM03 316 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms