RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 PILRAQ9UKJ1 303 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 REXO2Q9Y3B8 237 aaKnown RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 PKP3Q9Y446 797 aa13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 DNMT3AQ9Y6K1 912 aaPredicted RBP13.23□□□□□ -0.29
CTDSP1-208ENST00000482272 BSNQ9UPA5 3926 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 GLYATL1P3A0A0U1RQE8 302 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 PRR19A6NJB7 356 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 H7C0C1 242 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC28A2O43868 658 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 C9P02748 559 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 ANKRD34CP0C6C1 535 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 LIFP15018 202 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 ATP5OP48047 213 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 GEMP55040 296 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 COPS2P61201 443 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 NFATC3Q12968 1075 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 PPP2R5EQ16537 467 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 LDLRAP1Q5SW96 308 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 C11orf63Q6NUN7 778 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 MICALCLQ6ZW33 695 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 BBS12Q6ZW61 710 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 GLT6D1Q7Z4J2 308 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 TRAPPC5Q8IUR0 188 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF547Q8IVP9 402 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 TTC30BQ8N4P2 665 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 IPMKQ8NFU5 416 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 BLOC1S5Q8TDH9 187 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 C9orf72Q96LT7 481 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 HEMGNQ9BXL5 484 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 FSD1LQ9BXM9 530 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 SPRY4Q9C004 299 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 RBSNQ9H1K0 784 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 IL26Q9NPH9 171 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 DUSP10Q9Y6W6 482 aa13.22□□□□□ -0.29
CTDSP1-208ENST00000482272 MN1Q10571 1320 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 A0A0U1RQJ8 604 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 SOWAHDA6NJG2 315 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 APOC4-APOC2K7ER74 178 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 STX7O15400 261 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 ANXA9O76027 345 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 ZIC2O95409 532 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 APOC2P02655 101 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 TYRP1P17643 537 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 CETN2P41208 172 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 DRG2P55039 364 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 NAP1L1P55209 391 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 FOXM1Q08050 763 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 OLIG2Q13516 323 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 CHRNA6Q15825 494 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 ITPRIPL1Q6GPH6 555 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 BORAQ6PGQ7 559 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 TMEM220Q6QAJ8 160 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 AMZ2Q86W34 360 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 CATSPER2Q96P56 530 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 TGM7Q96PF1 710 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 QKIQ96PU8 341 aaKnown RBP eCLIP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 GPN2Q9H9Y4 310 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 APMAPQ9HDC9 416 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC40A1Q9NP59 571 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 TRIM10Q9UDY6 481 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 EFR3BQ9Y2G0 817 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 AAR2Q9Y312 384 aaKnown RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 TMEM184BQ9Y519 407 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 EPN1Q9Y6I3 576 aaPredicted RBP13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 SLC30A1Q9Y6M5 507 aa13.21□□□□□ -0.29
CTDSP1-208ENST00000482272 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 UNC79Q9P2D8 2635 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 C2orf81A6NN90 581 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 GAPDHSO14556 408 aaPredicted RBP13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 UGT1A9O60656 530 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 POP7O75817 140 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 STK17BO94768 372 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 IPO7O95373 1038 aaKnown RBP13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 FAM87AP0C7U9 286 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 BRAFP15056 766 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 ITGB6P18564 788 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 UGT1A6P19224 532 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 UGT1A1P22309 533 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 UGT1A4P22310 534 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 FECHP22830 423 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 CTNNA2P26232 953 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 RBL1P28749 1068 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 SEPHS1P49903 392 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 GFERP55789 205 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 ABHD18Q0P651 414 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 PRPSAP1Q14558 356 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 PTPRCAPQ14761 206 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 CLCA4Q14CN2 919 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 FAM151BQ6UXP7 276 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 RAD9BQ6WBX8 426 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 PRICKLE2Q7Z3G6 844 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 C11orf96Q7Z7L8 435 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 GAS2L3Q86XJ1 694 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 TMTC1Q8IUR5 882 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 DDHD1Q8NEL9 900 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 ZNF398Q8TD17 642 aa13.2□□□□□ -0.3
CTDSP1-208ENST00000482272 ZDHHC12Q96GR4 267 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms