RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 LIN7BQ9HAP6 207 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 C12orf4Q9NQ89 552 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 SFMBT1Q9UHJ3 866 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 AURKCQ9UQB9 309 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 NRCAMQ92823 1304 aa10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 COL4A4P53420 1690 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-204ENST00000409357 WDR27A2RRH5 827 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 LCHNA4D1U4 455 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MBLAC1A4D2B0 266 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TRIM77I1YAP6 450 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 hCG_2039718K7EN88 272 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ARPC2O15144 300 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TBC1D4O60343 1298 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TRIM3O75382 744 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 UGT2B17O75795 530 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MATN4O95460 622 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ASS1P00966 412 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 NPPAP01160 153 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CA3P07451 260 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SBK3P0C264 359 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CHRM3P20309 590 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 IL4RP24394 825 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ERP29P30040 261 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 STAT5BP51692 787 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 NRLP54845 237 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 UGT2B15P54855 530 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 INCA1Q0VD86 236 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 BAMBIQ13145 260 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PLCL1Q15111 1095 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 RFX4Q33E94 735 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 FSTL4Q6MZW2 842 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TRMT1LQ7Z2T5 733 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PAGE2Q7Z2X7 111 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TMEM135Q86UB9 458 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBTB46Q86UZ6 589 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 XYLT1Q86Y38 959 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 FBXL6Q8N531 539 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PSMA8Q8TAA3 256 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 LHFPL5Q8TAF8 219 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ERLEC1Q96DZ1 483 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 APOL4Q9BPW4 351 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MTIF3Q9H2K0 278 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PRDM12Q9H4Q4 367 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 DUSP21Q9H596 190 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 EML4Q9HC35 981 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ZFP14Q9HCL3 533 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 RPRD1BQ9NQG5 326 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 KMT5AQ9NQR1 393 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 B3GNT2Q9NY97 397 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SLCO3A1Q9UIG8 710 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TLR6Q9Y2C9 796 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PCDHGB2Q9Y5G2 931 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PSAT1Q9Y617 370 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 AUP1Q9Y679 476 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 C5orf42Q9H799 3197 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ZBTB42B2RXF5 422 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ANGPT2O15123 496 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MDM4O15151 490 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SLC16A6O15403 523 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SLITRK5O94991 958 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TNNI1P19237 187 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 HTR1EP28566 365 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 YWHABP31946 246 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CD68P34810 354 aaPredicted RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ETFBP38117 255 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ST13P50502 369 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 KPNA2P52292 529 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 MAPK10P53779 464 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 NAGLUP54802 743 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 GPR50Q13585 617 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 PTPN20Q4JDL3 420 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SNAP47Q5SQN1 464 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CATSPEREQ5SY80 951 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CNKSR3Q6P9H4 555 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.53□□□□□ -0.726e-6■■■□□ 19.1
NIF3L1-204ENST00000409357 ZNF438Q7Z4V0 828 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 NOXA1Q86UR1 476 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ZC3HC1Q86WB0 502 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SPPL2CQ8IUH8 684 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 SVOPLQ8N434 492 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 DBF4BQ8NFT6 615 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ADAM32Q8TC27 787 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 DNAJB3Q8WWF6 145 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 NXNL1Q96CM4 212 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TMCO6Q96DC7 493 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 LGALS12Q96DT0 336 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 GPR22Q99680 433 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 FAM213AQ9BRX8 229 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 TRMOQ9BU70 441 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 KAT8Q9H7Z6 458 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 CCNB1IP1Q9NPC3 277 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ABCB10Q9NRK6 738 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 ZNF358Q9NW07 568 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 FAM118AQ9NWS6 357 aa10.53□□□□□ -0.72
NIF3L1-204ENST00000409357 FBXL12Q9NXK8 326 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms