RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CTRCQ99895 268 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 TIMM29Q9BSF4 260 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 FSD1LQ9BXM9 530 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 FAM96AQ9H5X1 160 aa16.45■□□□□ 0.22
PDLIM7-201ENST00000355572 KIR2DS5A0A0G2JLQ3 304 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 A0A0G2JNG1 304 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 EFCAB7A8K855 629 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 KIR2DS3K7RE56 304 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 LIPCP11150 499 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 TYRP1P17643 537 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 XRCC1P18887 633 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 LEPRP48357 1165 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 CDKN1CP49918 316 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 PPP1CAP62136 330 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 TMPRSS15P98073 1019 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 LY6DQ14210 128 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 NFE2L1Q14494 772 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 KIR2DS5Q14953 304 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 CLPPQ16740 277 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 ANKS6Q68DC2 871 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 ITPRIPL1Q6GPH6 555 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 TMEM220Q6QAJ8 160 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 ABRAXAS1Q6UWZ7 409 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 DET1Q7L5Y6 550 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 TRAPPC5Q8IUR0 188 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 LILRA3Q8N6C8 439 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 FAM71DQ8N9W8 422 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 OR10G6Q8NH81 332 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 GDAP1Q8TB36 358 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 SLC35B2Q8TB61 432 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 RSC1A1Q92681 617 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 TMEM159Q96B96 161 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 CCNL2Q96S94 520 aaPredicted RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 PIH1D1Q9NWS0 290 aaKnown RBP16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 HACD3Q9P035 362 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 PSMD13Q9UNM6 376 aa16.44■□□□□ 0.22
PDLIM7-201ENST00000355572 LILRA5A6NI73 299 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 PDZK1P1A8MUH7 402 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 GPR89AB7ZAQ6 455 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 DUX1O43812 170 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 POP7O75817 140 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 IPO7O95373 1038 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 PRAMEF1O95521 474 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 GPR89BP0CG08 455 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 PBLDP30039 288 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 ZNF140P52738 457 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 TRA2AQ13595 282 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 TAF1AQ15573 450 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 DUS1LQ6P1R4 473 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 WDR74Q6RFH5 385 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 CCDC81Q6ZN84 652 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 TMEM26Q6ZUK4 368 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 DTX3LQ8TDB6 740 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 AHCYL2Q96HN2 611 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 SRPK1Q96SB4 655 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 NRTNQ99748 197 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 TMEM121Q9BTD3 319 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 SPRY4Q9C004 299 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 MN1Q10571 1320 aaPredicted RBP16.43■□□□□ 0.22
PDLIM7-201ENST00000355572 C5orf60A6NFR6 353 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 STX7O15400 261 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 LDB2O43679 373 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 ANXA9O76027 345 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 TJP3O95049 919 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 C9P02748 559 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 TPH1P17752 444 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 LPOP22079 712 aaPredicted RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 EPHA4P54764 986 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 UCNP55089 124 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 CYP4F2P78329 520 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 KIF5AQ12840 1032 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 GPR18Q14330 331 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 FAM129CQ86XR2 697 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 ZNF398Q8TD17 642 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 NKD1Q969G9 470 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 SGF29Q96ES7 293 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 CALR3Q96L12 384 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 TAAR9Q96RI9 348 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 TBL1YQ9BQ87 522 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 SLC40A1Q9NP59 571 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 SMOXQ9NWM0 555 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 SIDT1Q9NXL6 827 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 PCDHGA3Q9Y5H0 932 aa16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 CFAP20Q9Y6A4 193 aaKnown RBP16.42■□□□□ 0.22
PDLIM7-201ENST00000355572 OR5K4A6NMS3 321 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 AGAP14A8MT82 685 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 SRP72O76094 671 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 CSTF2P33240 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 PPM1FP49593 454 aaPredicted RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 LINC00303Q3SY05 128 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 FNBP1LQ5T0N5 605 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 AGAP9Q5VTM2 703 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 WASH2PQ6VEQ5 465 aa16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 TIPARPQ7Z3E1 657 aaKnown RBP16.41■□□□□ 0.22
PDLIM7-201ENST00000355572 ZNF843Q8N446 348 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms