RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZDHHC20Q5W0Z9 365 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ZCCHC23Q6ZST2 131 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TBC1D1Q86TI0 1168 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 LCA5Q86VQ0 697 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 NUDCD3Q8IVD9 361 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 C10orf107Q8IVU9 208 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 RBFAQ8N0V3 343 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PELI3Q8N2H9 469 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CLDN19Q8N6F1 224 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SIDT2Q8NBJ9 832 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TXNDC5Q8NBS9 432 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CD200R1Q8TD46 325 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 GPR21Q99679 349 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 RIOK2Q9BVS4 552 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SPATA16Q9BXB7 569 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 MKRN2Q9H000 416 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SLC6A17Q9H1V8 727 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CCDC68Q9H2F9 335 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 FAM83DQ9H4H8 585 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 POPDC3Q9HBV1 291 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 DYRK4Q9NR20 520 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CPSF2Q9P2I0 782 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 XPR1Q9UBH6 696 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 IKZF3Q9UKT9 509 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 FADS3Q9Y5Q0 445 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 OAS3Q9Y6K5 1087 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 F5P12259 2224 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 IGLV3-16A0A075B6K0 115 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 LOC730098B7Z3J9 87 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PSMD11O00231 422 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 NDUFAB1O14561 156 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SYNCRIPO60506 623 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 EDF1O60869 148 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 MMP20O60882 483 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SOD1P00441 154 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ESR1P03372 595 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 LTA4HP09960 611 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 C6P13671 934 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CPA3P15088 417 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CD1DP15813 335 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF7P17097 686 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CD72P21854 359 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CD9P21926 228 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CLCN7P51798 805 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TAS2R38P59533 333 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 RPS14P62263 151 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 GRSF1Q12849 480 aaKnown RBP eCLIP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PDAP1Q13442 181 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ITGA9Q13797 1035 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ITIH4Q14624 930 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ACOX1Q15067 660 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TSNAXIP1Q2TAA8 658 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 KHDC1Q4VXA5 237 aaKnown RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TECRLQ5HYJ1 363 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 GPRC6AQ5T6X5 926 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 FAM46CQ5VWP2 391 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 LYPLAL1Q5VWZ2 237 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PAQR3Q6TCH7 311 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ATG14Q6ZNE5 492 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 OTOAQ7RTW8 1153 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 CPLX4Q7Z7G2 160 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TRAM1L1Q8N609 369 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 OR2T3Q8NH03 318 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 KCNJ9Q92806 393 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 PTERQ96BW5 349 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 DTD2Q96FN9 168 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SCYL1Q96KG9 808 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 C20orf27Q9GZN8 174 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ZNF395Q9H8N7 513 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SLC2A4RGQ9NR83 387 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 SMOXQ9NWM0 555 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 ZDHHC3Q9NYG2 299 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 TAS2R13Q9NYV9 303 aa6.89□□□□□ -1.31
PTCD2-201ENST00000308077 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
PTCD2-201ENST00000308077 DOCK9Q9BZ29 2069 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 A0A1W2PP55 124 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RGSL1A5PLK6 1076 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 KLF11O14901 512 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 WNT9AO14904 365 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ZBTB14O43829 449 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 MTX2O75431 263 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 VPS26AO75436 327 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 RECQL5O94762 991 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TSPAN12O95859 305 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ADH1BP00325 375 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SRFP11831 508 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 HOXB2P14652 356 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 GLULP15104 373 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ITGB6P18564 788 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TFEBP19484 476 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 ARRB2P32121 409 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 PPARGP37231 505 aaPredicted RBP6.88□□□□□ -1.31
PTCD2-201ENST00000308077 SLC26A3P40879 764 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 KCNC1P48547 511 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CREB5Q02930 508 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 BST1Q10588 318 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 TDGQ13569 410 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 CCINQ13939 588 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 E2F5Q15329 346 aa6.88□□□□□ -1.31
PTCD2-201ENST00000308077 FAM83EQ2M2I3 478 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms