RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 FBXO5Q9UKT4 447 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 MTO1Q9Y2Z2 717 aaKnown RBP16.45■□□□□ 0.22
TPM1-219ENST00000559397 DOCK9Q9BZ29 2069 aa16.45■□□□□ 0.22
TPM1-219ENST00000559397 IGLON5A6NGN9 336 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 C2orf81A6NN90 581 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 BUD23O43709 281 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 RPP40O75818 363 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 SP9P0CG40 484 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 TAC1P20366 129 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 LPOP22079 712 aaPredicted RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 SLC1A2P43004 574 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 CCT5P48643 541 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 POLD2P49005 469 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 SERPINB8P50452 374 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 RPS21P63220 83 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 CTBP1Q13363 440 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 PDE1CQ14123 709 aaPredicted RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 PTPRCAPQ14761 206 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 PDK4Q16654 411 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 RFLNAQ6ZTI6 216 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 TAX1BP1Q86VP1 789 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 TRIM69Q86WT6 500 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 HORMAD1Q86X24 394 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 RAVER1Q8IY67 606 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 GABPB2Q8TAK5 448 aaPredicted RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 ZNF473Q8WTR7 871 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 DNAJC1Q96KC8 554 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 SPACA7Q96KW9 195 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 GPR174Q9BXC1 333 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 VPS11Q9H270 941 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 C12orf65Q9H3J6 166 aaKnown RBP16.44■□□□□ 0.22
TPM1-219ENST00000559397 RABEP2Q9H5N1 569 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 SNX15Q9NRS6 342 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 PCMTD2Q9NV79 361 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 COQ6Q9Y2Z9 468 aa16.44■□□□□ 0.22
TPM1-219ENST00000559397 PRR23AA6NEV1 266 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 NDUFAB1O14561 156 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SLC4A1P02730 911 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 F7P08709 466 aaPredicted RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 BCKDHBP21953 392 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SPINT3P49223 89 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 MPP1Q00013 466 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 FGL2Q14314 439 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 INSCQ1MX18 579 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ZNF284Q2VY69 593 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ZNF470Q6ECI4 717 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 LRRC34Q8IZ02 419 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 GPR150Q8NGU9 434 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 TBATAQ96M53 351 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 C19orf43Q9BQ61 176 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 LRFN3Q9BTN0 628 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SLC13A1Q9BZW2 595 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 BPIFA1Q9NP55 256 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 NLE1Q9NVX2 485 aaPredicted RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 TCP11X1B4DZS4 312 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 TM7SF2O76062 418 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 IGHV4-34P06331 123 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 BPIP17213 487 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 TYK2P29597 1187 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ETV3P41162 512 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 LEPRP48357 1165 aaKnown RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 CD151P48509 253 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 PRAMEP78395 509 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ACOX1Q15067 660 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 AGERQ15109 404 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SEPT7Q16181 437 aaKnown RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 KIAA0895LQ68EN5 471 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SLC36A4Q6YBV0 504 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 Q6ZVL8 140 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 MICALCLQ6ZW33 695 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ZNF771Q7L3S4 317 aaPredicted RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 CYP2U1Q7Z449 544 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 CILP2Q8IUL8 1156 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ACVR1CQ8NER5 493 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 OR4K2Q8NGD2 314 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 OR13C4Q8NGS5 318 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 DTD2Q96FN9 168 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 FAM111AQ96PZ2 611 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 PAIP2Q9BPZ3 127 aaKnown RBP16.43■□□□□ 0.22
TPM1-219ENST00000559397 C1QTNF2Q9BXJ5 285 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 SLC17A9Q9BYT1 436 aa16.43■□□□□ 0.22
TPM1-219ENST00000559397 ZNF106Q9H2Y7 1883 aaKnown RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 CEP192Q8TEP8 1941 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 RGSL1A5PLK6 1076 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 WNT9AO14904 365 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 STX7O15400 261 aaKnown RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 LATO43561 262 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 LZTS3O60299 673 aaPredicted RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 GLRA3O75311 464 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 RECQL5O94762 991 aaPredicted RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 MPOP05164 745 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ABCG1P45844 678 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 CCR5P51681 352 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 KYAT3Q6YP21 454 aaKnown RBP16.42■□□□□ 0.22
TPM1-219ENST00000559397 CMC1Q7Z7K0 106 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 NRSN1Q8IZ57 195 aa16.42■□□□□ 0.22
TPM1-219ENST00000559397 ZBTB44Q8NCP5 570 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms