RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ADRA1BP35368 520 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TRIM23P36406 574 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 STAT6P42226 847 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ACADSBP45954 432 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 FASLGP48023 281 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 SERPINH1P50454 418 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 VAV2P52735 878 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 YWHAZP63104 245 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 STILQ15468 1287 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 CNGA2Q16280 664 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 KYNUQ16719 465 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 C5orf22Q49AR2 442 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF468Q5VIY5 522 aaPredicted RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 CPZQ66K79 652 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 PMF1Q6P1K2 205 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 MYO7BQ6PIF6 2116 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 LCLAT1Q6UWP7 414 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM207Q6UWW9 146 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 Q6ZS92 163 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 EPM2AIP1Q7L775 607 aaPredicted RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TRIM46Q7Z4K8 759 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 CIR1Q86X95 450 aaPredicted RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 SFTPA2Q8IWL1 248 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 NELFCDQ8IXH7 590 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 FAM186BQ8IYM0 893 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 NAGSQ8N159 534 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 AVL9Q8NBF6 648 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 CCL4L1Q8NHW4 92 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 DNAJB14Q8TBM8 379 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 TMEM174Q8WUU8 243 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 HMCESQ96FZ2 354 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 OR6C1Q96RD1 312 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 WRAP53Q9BUR4 548 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 FGFBP2Q9BYJ0 223 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 PANK2Q9BZ23 570 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 MIS12Q9H081 205 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 CXXC4Q9H2H0 198 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 APOBEC3GQ9HC16 384 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ENAMQ9NRM1 1142 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 GOLGA6AQ9NYA3 693 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 VANGL2Q9ULK5 521 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 RPH3AQ9Y2J0 694 aaPredicted RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 HS3ST4Q9Y661 456 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 PRRC2AP48634 2157 aaKnown RBP5.13□□□□□ -1.59
CKAP4-203ENST00000553039 COL6A5A8TX70 2615 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 ACANP16112 2415 aa5.13□□□□□ -1.59
CKAP4-203ENST00000553039 PRSS38A1L453 326 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 KIAA1324LA8MWY0 1029 aaPredicted RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FOXO6A8MYZ6 492 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 MASP2O00187 686 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PEX12O00623 359 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RGS13O14921 159 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 TEX33O43247 280 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 CLDN14O95500 239 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 GSRP00390 522 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PCCBP05166 539 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 UGT2B4P06133 528 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FYNP06241 537 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RAB40ALP0C0E4 278 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 KRT13P13646 458 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF28P17035 718 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 EPHA1P21709 976 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 HNRNPH3P31942 346 aaKnown RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 GTF2H1P32780 548 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 CSF2RBP32927 897 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PBX1P40424 430 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RGS7P49802 495 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SMCPP49901 116 aaPredicted RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 IST1P53990 364 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 DLG4P78352 724 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FOLH1Q04609 750 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RBPJQ06330 500 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ITKQ08881 620 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 GRM3Q14832 879 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 MYBPC3Q14896 1274 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 LLGL1Q15334 1064 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 GFOD2Q3B7J2 385 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ANKRD39Q53RE8 183 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FAM26FQ5R3K3 315 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SYPL2Q5VXT5 272 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 CES4AQ5XG92 561 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SLC30A9Q6PML9 568 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FAM180AQ6UWF9 173 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 RIPOR1Q6ZS17 1223 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 LHFPL2Q6ZUX7 228 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF765Q7L2R6 523 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 SLC9B2Q86UD5 537 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ZNF227Q86WZ6 799 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 NRROSQ86YC3 692 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 CBARPQ8N350 705 aaPredicted RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 BCORP1Q8N888 145 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 CLEC1AQ8NC01 280 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 OR2AP1Q8NGE2 309 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 OR52K2Q8NGK3 314 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PLEKHO2Q8TD55 490 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 GRHL3Q8TE85 626 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 FUBP1Q96AE4 644 aaKnown RBP5.12□□□□□ -1.59
CKAP4-203ENST00000553039 PDXPQ96GD0 296 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 ELMO2Q96JJ3 720 aa5.12□□□□□ -1.59
CKAP4-203ENST00000553039 C1orf74Q96LT6 269 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms