RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ACAP2Q15057 778 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DGUOKQ16854 277 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PLA2G4EQ3MJ16 856 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 RSBN1Q5VWQ0 802 aaPredicted RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 DPP9Q86TI2 863 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SLC22A16Q86VW1 577 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 RIOX2Q8IUF8 465 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PELI3Q8N2H9 469 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SCAIQ8N9R8 606 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CDK15Q96Q40 435 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PRKD2Q9BZL6 878 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ADAMTS10Q9H324 1103 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZNF385DQ9H6B1 395 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CATSPERBQ9H7T0 1116 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 IGSF5Q9NSI5 407 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 INTS10Q9NVR2 710 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 MAP10Q9P2G4 905 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 AASSQ9UDR5 926 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZMYM5Q9UJ78 669 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 IGKV6-21A0A0C4DH24 114 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 INMTO95050 263 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 FAM163BP0C2L3 166 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 MBL2P11226 248 aaPredicted RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 HPCAL1P37235 193 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 POLR2JP52435 117 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 DGKQP52824 942 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 OR4D2P58180 307 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CLCQ05315 142 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DAG1Q14118 895 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SNX17Q15036 470 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CYBRD1Q53TN4 286 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZNF678Q5SXM1 525 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 TBPL2Q6SJ96 375 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 LRRC8DQ7L1W4 858 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 TAC4Q86UU9 113 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 RAVER1Q8IY67 606 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 EFHBQ8N7U6 833 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 MFSD2AQ8NA29 543 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ISL2Q96A47 359 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZUFSPQ96AP4 578 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ITCHQ96J02 903 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SLC30A3Q99726 388 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 NEURL2Q9BR09 285 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 TRMOQ9BU70 441 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ASPSCR1Q9BZE9 553 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SLC39A8Q9C0K1 460 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 RASSF1Q9NS23 344 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 POLG2Q9UHN1 485 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ZNHIT2Q9UHR6 403 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 LOC100506127A0A0U1RQW1 187 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ENPP3O14638 875 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 TPD52L2O43399 206 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 TBX1O43435 398 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CDK14O94921 469 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CYBBP04839 570 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DBTP11182 482 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 AGXTP21549 392 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 GPX3P22352 226 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 FMO3P31513 532 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 POLR2IP36954 125 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 PNPLA4P41247 253 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 KCNC1P48547 511 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 CDKN2DP55273 166 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DAOAP59103 153 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ADAM17P78536 824 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PFKPQ01813 784 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DSC2Q02487 901 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 GALNT2Q10471 571 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 UNC50Q53HI1 259 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PAGE3Q5JUK9 113 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 MARC1Q5VT66 337 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 MRNIPQ6NTE8 343 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 IL27RAQ6UWB1 636 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 GCNT7Q6ZNI0 430 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 GPRIN1Q7Z2K8 1008 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DCP1BQ8IZD4 617 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 METTL6Q8TCB7 284 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 DNAJB3Q8WWF6 145 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SNX27Q96L92 541 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SPON2Q9BUD6 331 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 WDR12Q9GZL7 423 aaKnown RBP9.01□□□□□ -0.97
COPB1-202ENST00000439561 ROGDIQ9GZN7 287 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 GSTO2Q9H4Y5 243 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 RIC8BQ9NVN3 520 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 SCN3BQ9NY72 215 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 TMEM9Q9P0T7 183 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 PCDHB3Q9Y5E6 796 aa9.01□□□□□ -0.97
COPB1-202ENST00000439561 ASNA1O43681 348 aa9□□□□□ -0.97
COPB1-202ENST00000439561 ABCB7O75027 752 aa9□□□□□ -0.97
COPB1-202ENST00000439561 NDUFS2O75306 463 aa9□□□□□ -0.97
COPB1-202ENST00000439561 BCAS1O75363 584 aaPredicted RBP9□□□□□ -0.97
COPB1-202ENST00000439561 ANXA6P08133 673 aa9□□□□□ -0.97
COPB1-202ENST00000439561 SLC2A4P14672 509 aa9□□□□□ -0.97
COPB1-202ENST00000439561 ZNF37AP17032 561 aaPredicted RBP9□□□□□ -0.97
COPB1-202ENST00000439561 RCVRNP35243 200 aa9□□□□□ -0.97
COPB1-202ENST00000439561 IDUAP35475 653 aa9□□□□□ -0.97
COPB1-202ENST00000439561 ARHGDIAP52565 204 aa9□□□□□ -0.97
COPB1-202ENST00000439561 LILRA4P59901 499 aa9□□□□□ -0.97
COPB1-202ENST00000439561 HERVK_113P63132 956 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms