RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 DNALI1O14645 258 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 AURKAO14965 403 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 MLNP12872 115 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 HNRNPKP61978 463 aaKnown RBP eCLIP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 BNC1Q01954 994 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 SLC14A1Q13336 389 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 POU6F1Q14863 301 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 SUZ12Q15022 739 aaKnown RBP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 ADAMTSL4Q6UY14 1074 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 BBOF1Q8ND07 529 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 GPR26Q8NDV2 337 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 CPT1BQ92523 772 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 PEX13Q92968 403 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 SCAMP4Q969E2 229 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 FUBP1Q96AE4 644 aaKnown RBP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 EID2BQ96D98 161 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 TEX101Q9BY14 249 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 FRMD8Q9BZ67 464 aaPredicted RBP12.11□□□□□ -0.47
SF3B3-208ENST00000567250 RAB17Q9H0T7 212 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 DNAJC28Q9NX36 388 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 KLQ9UEF7 1012 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 ARL5AQ9Y689 179 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 PLXNB3Q9ULL4 1909 aa12.11□□□□□ -0.47
SF3B3-208ENST00000567250 TNFRSF10CO14798 259 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 TTI1O43156 1089 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 RASGRP1O95267 797 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PRAMEF1O95521 474 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 NME1P15531 152 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 BPIP17213 487 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 ADRA1DP25100 572 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 EPHA8P29322 1005 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PTGIRP43119 386 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 RXRGP48443 463 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 NPY2RP49146 381 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 ZNF140P52738 457 aaPredicted RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PPARDQ03181 441 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 FZD2Q14332 565 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 SKIDA1Q1XH10 827 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 STPG1Q5TH74 334 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 IZUMO3Q5VZ72 239 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 C8orf74Q6P047 294 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 LRRC8BQ6P9F7 803 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 MCUQ8NE86 351 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 OR4K2Q8NGD2 314 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 OR56A4Q8NGH8 313 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 STYXQ8WUJ0 223 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PTCD2Q8WV60 388 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 SNF8Q96H20 258 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 HIC2Q96JB3 615 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 VPS35Q96QK1 796 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 ZCCHC2Q9C0B9 1178 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 BPIFA1Q9NP55 256 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 TM7SF3Q9NS93 570 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 SMOXQ9NWM0 555 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PIH1D1Q9NWS0 290 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 SAMD15Q9P1V8 674 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 APOBEC3BQ9UH17 382 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 CDV3Q9UKY7 258 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 FNDC3AQ9Y2H6 1198 aaKnown RBP12.1□□□□□ -0.47
SF3B3-208ENST00000567250 PCDHGB2Q9Y5G2 931 aa12.1□□□□□ -0.47
SF3B3-208ENST00000567250 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 EFCAB8A8MWE9 144 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 GPR89AB7ZAQ6 455 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 H7C0S8 307 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 FLRT2O43155 660 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 LDB2O43679 373 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 PCDHGA12O60330 932 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 TMEM63AO94886 807 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 SOD1P00441 154 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CSF2P04141 144 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 GPR89BP0CG08 455 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 TPH1P17752 444 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 ITGALP20701 1170 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 GRIA1P42261 906 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 TERF1P54274 439 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 SESN2P58004 480 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 MSLNQ13421 630 aaPredicted RBP12.09□□□□□ -0.47
SF3B3-208ENST00000567250 MORF4L2Q15014 288 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 PCID2Q5JVF3 399 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
SF3B3-208ENST00000567250 ENPP7Q6UWV6 458 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 FAM151BQ6UXP7 276 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 RFLNAQ6ZTI6 216 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 PHACTR4Q8IZ21 702 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 NAT8LQ8N9F0 302 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 OR13C4Q8NGS5 318 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 ULK4Q96C45 1275 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 TBATAQ96M53 351 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 TRIM51Q9BSJ1 452 aa12.09□□□□□ -0.47
SF3B3-208ENST00000567250 SLC13A1Q9BZW2 595 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms