RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PGAM1P18669 254 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 LPOP22079 712 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 CD38P28907 300 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 MAGEA4P43358 317 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 CSNK1EP49674 416 aaKnown RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 AFF3P51826 1226 aaKnown RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 GPX6P59796 221 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 CRYMQ14894 314 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 LRRC14Q15048 493 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 IRF4Q15306 451 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 ANKRD20A4Q4UJ75 823 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 TRIM61Q5EBN2 209 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 PLA2G2CQ5R387 149 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 ARMC3Q5W041 872 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 TCEAL6Q6IPX3 200 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 ESRP1Q6NXG1 681 aaKnown RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 CASC4Q6P4E1 433 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 KDM7AQ6ZMT4 941 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 UNC5AQ6ZN44 842 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 Q6ZVL8 140 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 TECPR1Q7Z6L1 1165 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 RABEPKQ7Z6M1 372 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 TP53I13Q8NBR0 393 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 TMEM145Q8NBT3 493 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 DENND6BQ8NEG7 585 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 CEP76Q8TAP6 659 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 TCEAL3Q969E4 200 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 ZNF669Q96BR6 464 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 NUS1Q96E22 293 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 CFAP36Q96G28 342 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 LENG8Q96PV6 779 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 KLF6Q99612 283 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 BPIFA1Q9NP55 256 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 FSCN3Q9NQT6 498 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 MBNL1Q9NR56 388 aaKnown RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 NLE1Q9NVX2 485 aaPredicted RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 SAMD15Q9P1V8 674 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 RIMKLBQ9ULI2 386 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.26■□□□□ 0.03
LSM1-203ENST00000520755 PIKFYVEQ9Y2I7 2098 aa15.26■□□□□ 0.03
LSM1-203ENST00000520755 A0A1B0GVT2 93 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 KHNYNO15037 678 aaKnown RBP15.25■□□□□ 0.03
LSM1-203ENST00000520755 GFRA3O60609 400 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 USP1O94782 785 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 BPIP17213 487 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 MCM3P25205 808 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 IGFALSP35858 605 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 SPINT3P49223 89 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 TMPRSS15P98073 1019 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 TEAD4Q15561 434 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 WSCD2Q2TBF2 565 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 GCNT7Q6ZNI0 430 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 PTAR1Q7Z6K3 402 aaPredicted RBP15.25■□□□□ 0.03
LSM1-203ENST00000520755 UNC5BQ8IZJ1 945 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 GPR26Q8NDV2 337 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 STYXQ8WUJ0 223 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 PEX13Q92968 403 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 CENPTQ96BT3 561 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 DTD2Q96FN9 168 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 NUSAP1Q9BXS6 441 aaKnown RBP15.25■□□□□ 0.03
LSM1-203ENST00000520755 SEMA4GQ9NTN9 838 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 PKD2L2Q9NZM6 624 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 IL1RAPL1Q9NZN1 696 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 NFKBIL1Q9UBC1 381 aaPredicted RBP15.25■□□□□ 0.03
LSM1-203ENST00000520755 ZC3H7BQ9UGR2 993 aaKnown RBP15.25■□□□□ 0.03
LSM1-203ENST00000520755 FKBPLQ9UIM3 349 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 SLC6A14Q9UN76 642 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 RPS6KL1Q9Y6S9 549 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 FRYLO94915 3013 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 PCDH15Q96QU1 1955 aa15.25■□□□□ 0.03
LSM1-203ENST00000520755 UQCRHLA0A096LP55 91 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 A0A1W2PR77 199 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 POM121BA6NF01 834 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 OR51F1A6NGY5 319 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 C2orf81A6NN90 581 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 A6NNZ2 444 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 STX7O15400 261 aaKnown RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 GPR39O43194 453 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 C1QAP02745 245 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 WNT1P04628 370 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 TUBBP07437 444 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 UQCRHP07919 91 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 ZNF806P0C7X5 589 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 SSTR1P30872 391 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 CA5AP35218 305 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 C21orf59P57076 290 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 XIAPP98170 497 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 PEX6Q13608 980 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 AGERQ15109 404 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 SF3A2Q15428 464 aaKnown RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 SMAD1Q15797 465 aaKnown RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 UAP1Q16222 522 aaPredicted RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 KIAA0930Q6ICG6 404 aaPredicted RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 EMBQ6PCB8 327 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 TRMT10BQ6PF06 316 aaKnown RBP15.24■□□□□ 0.03
LSM1-203ENST00000520755 SLC23A3Q6PIS1 610 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 CAPN12Q6ZSI9 719 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 NLRP9Q7RTR0 991 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 PELI3Q8N2H9 469 aa15.24■□□□□ 0.03
LSM1-203ENST00000520755 MFSD2AQ8NA29 543 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms