RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 KLHL8Q9P2G9 620 aaPredicted RBP13.39□□□□□ -0.27
CLK3-213ENST00000563842 TRHDEQ9UKU6 1024 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 DOLKQ9UPQ8 538 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 MSRB2Q9Y3D2 182 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ADGRG1Q9Y653 693 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 ASXL3Q9C0F0 2248 aa13.39□□□□□ -0.27
CLK3-213ENST00000563842 RP1P56715 2156 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 FAM221BA6H8Z2 402 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 K7ESM1 405 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 TRIM38O00635 465 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 STK10O94804 968 aaKnown RBP13.38□□□□□ -0.27
CLK3-213ENST00000563842 ANXA6P08133 673 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 GM2AP17900 193 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 ACP1P24666 158 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 ETV3P41162 512 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
CLK3-213ENST00000563842 E2F1Q01094 437 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 PTSQ03393 145 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 CDK18Q07002 472 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 ADCY2Q08462 1091 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 IHHQ14623 411 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 QPCTQ16769 361 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 PRRT3Q5FWE3 981 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 KDM7AQ6ZMT4 941 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 Q6ZVL8 140 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 PID1Q7Z2X4 250 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 HSD11B1LQ7Z5J1 315 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 TECPR1Q7Z6L1 1165 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 TSPAN33Q86UF1 283 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 GKN2Q86XP6 184 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 HID1Q8IV36 788 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 CDKL3Q8IVW4 592 aaPredicted RBP13.38□□□□□ -0.27
CLK3-213ENST00000563842 LRRC8AQ8IWT6 810 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 OR56A4Q8NGH8 313 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 FUBP1Q96AE4 644 aaKnown RBP13.38□□□□□ -0.27
CLK3-213ENST00000563842 PKD2L2Q9NZM6 624 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 TRIM10Q9UDY6 481 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 FAM153AQ9UHL3 310 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 KLF15Q9UIH9 416 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 GUCA1BQ9UMX6 200 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 DGKBQ9Y6T7 804 aa13.38□□□□□ -0.27
CLK3-213ENST00000563842 MAP1BP46821 2468 aaKnown RBP13.38□□□□□ -0.27
CLK3-213ENST00000563842 C1orf232A0A0U1RR37 186 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 RGSL1A5PLK6 1076 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GOLGA6CA6NDK9 693 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 LMO7DNF2Z398 122 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 CCDC175P0C221 793 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GOLGA6DP0CG33 693 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GIMD1P0DJR0 217 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 PYGMP11217 842 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 MYCLP1P12525 358 aaPredicted RBP13.37□□□□□ -0.27
CLK3-213ENST00000563842 CKMT1AP12532 417 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GPR1P46091 355 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 RPIAP49247 311 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 ACADVLP49748 655 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 STC1P52823 247 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 OTUD4Q01804 1114 aaKnown RBP13.37□□□□□ -0.27
CLK3-213ENST00000563842 WASHC5Q12768 1159 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 DNAJC3Q13217 504 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 ALG11Q2TAA5 492 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 LVRNQ6Q4G3 990 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 B4GALNT4Q76KP1 1039 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 TMPRSS7Q7RTY8 843 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 TMPRSS12Q86WS5 348 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 RBFAQ8N0V3 343 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 ACTL9Q8TC94 416 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 ALG3Q92685 438 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 TSACCQ96A04 125 aaPredicted RBP13.37□□□□□ -0.27
CLK3-213ENST00000563842 TADA1Q96BN2 335 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 AP2M1Q96CW1 435 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 FCRL5Q96RD9 977 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 LRRC61Q9BV99 259 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 TEX101Q9BY14 249 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 CDH19Q9H159 772 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 MAGEE1Q9HCI5 957 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 GOLGA6AQ9NYA3 693 aa13.37□□□□□ -0.27
CLK3-213ENST00000563842 PMPCBO75439 489 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 CLDN7O95471 211 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 NDST3O95803 873 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 FTCDO95954 541 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 TOP3BO95985 862 aaKnown RBP13.36□□□□□ -0.27
CLK3-213ENST00000563842 MT-CYBP00156 380 aaPredicted RBP13.36□□□□□ -0.27
CLK3-213ENST00000563842 EPOP01588 193 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 RBP3P10745 1247 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 SPINK2P20155 84 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 EIF3EP60228 445 aaKnown RBP13.36□□□□□ -0.27
CLK3-213ENST00000563842 SMAD1Q15797 465 aaKnown RBP13.36□□□□□ -0.27
CLK3-213ENST00000563842 PCSK7Q16549 785 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 DEFB133Q30KQ1 61 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 DARS2Q6PI48 645 aaKnown RBP13.36□□□□□ -0.27
CLK3-213ENST00000563842 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
CLK3-213ENST00000563842 RD3Q7Z3Z2 195 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms