RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 LBPP18428 481 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 PBX3P40426 434 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 GRIA3P42263 894 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 KCNC1P48547 511 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 TBX4P57082 545 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 SH3BP2P78314 561 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 DSC2Q02487 901 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 SLC10A7Q0GE19 358 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CYTH1Q15438 398 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 KCTD21Q4G0X4 260 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 LAYNQ6UX15 382 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 MYO1HQ8N1T3 1032 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
USB1-207ENST00000563149 OR9I1Q8NGQ6 314 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 FAM81AQ8TBF8 368 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 ARRDC2Q8TBH0 407 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 ADAMTS16Q8TE57 1224 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 TWIST2Q8WVJ9 160 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CANT1Q8WVQ1 401 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 TFAP2CQ92754 450 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 PTERQ96BW5 349 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 C3orf30Q96M34 536 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CIB1Q99828 191 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 PTPN18Q99952 460 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 ZCWPW1Q9H0M4 648 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 FBXO44Q9H4M3 255 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 CAAP1Q9H8G2 361 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 AGO3Q9H9G7 860 aaKnown RBP13.08□□□□□ -0.32
USB1-207ENST00000563149 SYTL2Q9HCH5 934 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 DUS2Q9NX74 493 aaKnown RBP13.08□□□□□ -0.32
USB1-207ENST00000563149 MAP10Q9P2G4 905 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 DNAJC15Q9Y5T4 150 aa13.08□□□□□ -0.32
USB1-207ENST00000563149 A0A0U1RQF3 1178 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 NME4O00746 187 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ANGPT2O15123 496 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 CD3EAPO15446 510 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 AKAP10O43572 662 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 TIPRLO75663 272 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 RPP40O75818 363 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 POMCP01189 267 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 FCGR1AP12314 374 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ARSDP51689 593 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 NME5P56597 212 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 YBEYP58557 167 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 MAXP61244 160 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 MS4A13Q5J8X5 152 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 EFL1Q7Z2Z2 1120 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 SPATA19Q7Z5L4 167 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 RETREG3Q86VR2 466 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PHYKPLQ8IUZ5 450 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 DCP1BQ8IZD4 617 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 TNIP2Q8NFZ5 429 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PABPC5Q96DU9 382 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 C9orf16Q9BUW7 83 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ZNF408Q9H9D4 720 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 FBRSL1Q9HCM7 1045 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 INTS10Q9NVR2 710 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 MARCH4Q9P2E8 410 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 UXTQ9UBK9 157 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 A0A087WXM4 84 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ATP6AP2A0A1C7CYW4 349 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 KANSL1LA0AUZ9 987 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 DHRS12A0PJE2 317 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 MOXD2PA6NHM9 499 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 DRGXA6NNA5 263 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 NR5A2O00482 541 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 DUSP11O75319 330 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 ATP6AP2O75787 350 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 IGHA2P01877 340 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 GPIP06744 558 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 AKR1A1P14550 325 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 IDO1P14902 403 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ARSAP15289 507 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ZNF37AP17032 561 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 ATP6V1B2P21281 511 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 MYF6P23409 242 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 FASP25445 335 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PSMA4P25789 261 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 SLC5A2P31639 672 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PGFP49763 221 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 YWHAHQ04917 246 aaPredicted RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 DSC3Q14574 896 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PARP15Q460N3 678 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 PAN2Q504Q3 1202 aaKnown RBP13.07□□□□□ -0.32
USB1-207ENST00000563149 TBCELQ5QJ74 424 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 OGFOD2Q6N063 350 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 ZNF549Q6P9A3 640 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 SLC15A3Q8IY34 581 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 FUBP3Q96I24 572 aaKnown RBP eCLIP13.07□□□□□ -0.32
USB1-207ENST00000563149 BTN2A3PQ96KV6 586 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 C8orf48Q96LL4 319 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 TBATAQ96M53 351 aa13.07□□□□□ -0.32
USB1-207ENST00000563149 BIRC8Q96P09 236 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms