RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 TRIM43Q96BQ3 446 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 LENG8Q96PV6 779 aaPredicted RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 FEM1AQ9BSK4 669 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 TDRD1Q9BXT4 1180 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 TBC1D30Q9Y2I9 924 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 PDE5AO76074 875 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 IPO13O94829 963 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 CNPP09543 421 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 LAG3P18627 525 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 CDH13P55290 713 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 TNK2Q07912 1038 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 TRAF2Q12933 501 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 TBCCQ15814 346 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ZRANB3Q5FWF4 1079 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 PPM1LQ5SGD2 360 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 FRMD7Q6ZUT3 714 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 MFN1Q8IWA4 741 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 HIPK4Q8NE63 616 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 ZFRQ96KR1 1074 aaKnown RBP11.79□□□□□ -0.52
VTA1-203ENST00000452973 CCDC68Q9H2F9 335 aa11.79□□□□□ -0.52
VTA1-203ENST00000452973 A0A1W2PRU2 124 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 AIM2O14862 343 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 TGM5O43548 720 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 NDUFS3O75489 264 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CD160O95971 181 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 F11P03951 625 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 TPBGLP0DKB5 382 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 C1orf146Q5VVC0 180 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 FAM45BPQ6NSW5 357 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 ACAD11Q709F0 780 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 GAREM2Q75VX8 874 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 LCA5Q86VQ0 697 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 APCDD1Q8J025 514 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 FAM45AQ8TCE6 357 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 PTERQ96BW5 349 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 TRMT2BQ96GJ1 504 aaKnown RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 UBXN10Q96LJ8 280 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 DDX50Q9BQ39 737 aaKnown RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 SARS2Q9NP81 518 aaKnown RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 TNFRSF12AQ9NP84 129 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 SSX2IPQ9Y2D8 614 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 DOCK6Q96HP0 2047 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 ANKRD66B4E2M5 251 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 NRG2O14511 850 aaPredicted RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 OR1I1O60431 355 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 FGF18O76093 207 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 SRP72O76094 671 aaKnown RBP11.78□□□□□ -0.52
VTA1-203ENST00000452973 RHOBTB1O94844 696 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 RBP1P09455 135 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 MYL4P12829 197 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 KLF10Q13118 480 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 GEN1Q17RS7 908 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CHST9Q7L1S5 443 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 TAS2R42Q7RTR8 314 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 TCEAL8Q8IYN2 117 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 ADAMTS19Q8TE59 1207 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CMTM5Q96DZ9 223 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CFAP97Q9P2B7 532 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 SLC7A8Q9UHI5 535 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 VPS51Q9UID3 782 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 CLEC4EQ9ULY5 219 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 ANKRD12Q6UB98 2062 aa11.78□□□□□ -0.52
VTA1-203ENST00000452973 LRRC14BA6NHZ5 514 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 NCF1BA6NI72 391 aaPredicted RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 NCF1CA8MVU1 366 aaPredicted RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 STX7O15400 261 aaKnown RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 CIB2O75838 187 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 WFS1O76024 890 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 LRG1P02750 347 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 ALPIP09923 528 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 COX4I1P13073 169 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 NCF1P14598 390 aaPredicted RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 CR2P20023 1033 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 STC1P52823 247 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 SEMG2Q02383 582 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 ACAP2Q15057 778 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 DNAL1Q4LDG9 190 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 CLEC6AQ6EIG7 209 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 PIWIL4Q7Z3Z4 852 aaKnown RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 ISCA2Q86U28 154 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 CAMK1DQ8IU85 385 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 DEFB107AQ8IZN7 70 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 RPL10LQ96L21 214 aaKnown RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 CORO1BQ9BR76 489 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 HERC2P3Q9BVR0 1158 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 ADGRE3Q9BY15 652 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 POLR3BQ9NW08 1133 aaPredicted RBP11.77□□□□□ -0.52
VTA1-203ENST00000452973 PLA2G4CQ9UP65 541 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 TANC1Q9C0D5 1861 aa11.77□□□□□ -0.52
VTA1-203ENST00000452973 ATP6AP2A0A1C7CYW4 349 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 SMAD6O43541 496 aaKnown RBP11.77□□□□□ -0.53
VTA1-203ENST00000452973 ATP6AP2O75787 350 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 TM7SF2O76062 418 aa11.77□□□□□ -0.53
VTA1-203ENST00000452973 SIX3O95343 332 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms