RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TNFRSF10CO14798 259 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 KLHL30Q0D2K2 578 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 SLC10A7Q0GE19 358 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 TMCO4Q5TGY1 634 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 B3GNT8Q7Z7M8 397 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 PAF1Q8N7H5 531 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 WBP1Q96G27 269 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 NAP1L5Q96NT1 182 aaPredicted RBP18.53■□□□□ 0.56
CLN6-220ENST00000637450 FGF22Q9HCT0 170 aa18.53■□□□□ 0.56
CLN6-220ENST00000637450 MRPL47Q9HD33 250 aaKnown RBP18.53■□□□□ 0.56
CLN6-220ENST00000637450 A0A1B0GTH6 734 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.52■□□□□ 0.56
CLN6-220ENST00000637450 TTC24A2A3L6 582 aaPredicted RBP18.52■□□□□ 0.56
CLN6-220ENST00000637450 A8MX80 341 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 HTRA2O43464 458 aaPredicted RBP18.52■□□□□ 0.56
CLN6-220ENST00000637450 PEX11BO96011 259 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 RPLP0P05388 317 aaKnown RBP18.52■□□□□ 0.56
CLN6-220ENST00000637450 ITGA2BP08514 1039 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 MYBL1P10243 752 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 SKILP12757 684 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 KELP23276 732 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 IL1R2P27930 398 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 VAC14Q08AM6 782 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 DPYSL2Q16555 572 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 BOLA3Q53S33 107 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 PNCKQ6P2M8 343 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 POLNQ7Z5Q5 900 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 TAF8Q7Z7C8 310 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 PELI3Q8N2H9 469 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 ZNF843Q8N446 348 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 TRIM11Q96F44 468 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 COQ10AQ96MF6 247 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 LGR4Q9BXB1 951 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 ISCUQ9H1K1 167 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 LRRN3Q9H3W5 708 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 MRPL40Q9NQ50 206 aaKnown RBP18.52■□□□□ 0.56
CLN6-220ENST00000637450 ETNK2Q9NVF9 386 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 MYO1AQ9UBC5 1043 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 B4GALT6Q9UBX8 382 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 APPL1Q9UKG1 709 aa18.52■□□□□ 0.56
CLN6-220ENST00000637450 D6RAR5 112 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 H3BRJ5 948 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 PLD2O14939 933 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 CR2P20023 1033 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 AMPD1P23109 780 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 EIF3IQ13347 325 aaKnown RBP18.51■□□□□ 0.55
CLN6-220ENST00000637450 ACOX1Q15067 660 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 TAF1BQ53T94 588 aaPredicted RBP18.51■□□□□ 0.55
CLN6-220ENST00000637450 CBARPQ8N350 705 aaPredicted RBP18.51■□□□□ 0.55
CLN6-220ENST00000637450 FAM46DQ8NEK8 389 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 TMEM168Q9H0V1 697 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 EPB41L5Q9HCM4 733 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 PCDHGC4Q9Y5F7 938 aa18.51■□□□□ 0.55
CLN6-220ENST00000637450 LRRK1Q38SD2 2015 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 A0A1W2PQ67 120 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 NOBOXO60393 691 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 MAFKO60675 156 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 SOCS5O75159 536 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 TCF4P15884 667 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 PNLIPP16233 465 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 GLB1P16278 677 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 CCKBRP32239 447 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 UGT1A5P35504 534 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 HSPA9P38646 679 aaKnown RBP18.5■□□□□ 0.55
CLN6-220ENST00000637450 ARL4AP40617 200 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 INHBCP55103 352 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 CFHR1Q03591 330 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 ZNF235Q14590 738 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 NR1I3Q14994 352 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 SMTNL2Q2TAL5 461 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 TMCO3Q6UWJ1 677 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 PGBD5Q8N414 524 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 FBXO39Q8N4B4 442 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 Q8N9G6 341 aaPredicted RBP18.5■□□□□ 0.55
CLN6-220ENST00000637450 TMEM74Q96NL1 305 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 CSPG4P5Q96PW8 444 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 NUDCD1Q96RS6 583 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 FOXP3Q9BZS1 431 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 STRADBQ9C0K7 418 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 WDR26Q9H7D7 661 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 CYP4F12Q9HCS2 524 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 PCDHGA7Q9Y5G6 932 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 ZNF462Q96JM2 2506 aa18.5■□□□□ 0.55
CLN6-220ENST00000637450 KIF26BQ2KJY2 2108 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 K7ENP7 123 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 PDE2AO00408 941 aaPredicted RBP18.49■□□□□ 0.55
CLN6-220ENST00000637450 RARAP10276 462 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 CLN3Q13286 438 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 HLTFQ14527 1009 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN6-220ENST00000637450 CNGA3Q16281 694 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 INO80CQ6PI98 192 aaPredicted RBP18.49■□□□□ 0.55
CLN6-220ENST00000637450 CCNJLQ8IV13 435 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 SFTPA2Q8IWL1 248 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 CCL4L1Q8NHW4 92 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 HSPH1Q92598 858 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 TTC9Q92623 222 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 MGME1Q9BQP7 344 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms