RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ITPRIPL1Q6GPH6 555 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ERAP2Q6P179 960 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC137Q6PK04 289 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 DOK6Q6PKX4 331 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GCNT7Q6ZNI0 430 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PRR23CQ6ZRP0 262 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 USP45Q70EL2 814 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 DPPA4Q7L190 304 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PTAR1Q7Z6K3 402 aaPredicted RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM74Q86UV6 250 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM69Q86WT6 500 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SPATS2Q86XZ4 545 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SYT12Q8IV01 421 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRN4CLQ8ND94 238 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 CADM4Q8NFZ8 388 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 OR13H1Q8NG92 308 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 OR52K1Q8NGK4 314 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 C1orf216Q8TAB5 229 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ACTRT1Q8TDG2 376 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PTCD2Q8WV60 388 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 MAIP1Q8WWC4 291 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FOXJ1Q92949 421 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SCAMP4Q969E2 229 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FATE1Q969F0 183 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM131CQ96AQ9 280 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TADA1Q96BN2 335 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 EID2BQ96D98 161 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM122AQ96E09 287 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SCRN2Q96FV2 425 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 LRIG1Q96JA1 1093 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FEM1CQ96JP0 617 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 BMFQ96LC9 184 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PWWP2AQ96N64 755 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 LENG8Q96PV6 779 aaPredicted RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 KRT12Q99456 494 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TBL1YQ9BQ87 522 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FERMT1Q9BQL6 677 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIM56Q9BRZ2 755 aaKnown RBP4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 LGR4Q9BXB1 951 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 C1QTNF2Q9BXJ5 285 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FSD1LQ9BXM9 530 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 GPR63Q9BZJ6 419 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 KCNH6Q9H252 994 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM96AQ9H5X1 160 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PREBQ9HCU5 417 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 SEMA4GQ9NTN9 838 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 AMACRQ9UHK6 382 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 MOSPD1Q9UJG1 213 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 PILRBQ9UKJ0 227 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ANKRD6Q9Y2G4 727 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF711Q9Y462 761 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 ARL5AQ9Y689 179 aa4.61□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A0J9YYE9 177 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 LOC285095A0A1B0GVY8 99 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 A0A1W2PR77 199 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 LNP1A1A4G5 178 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CFAP69A5D8W1 941 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 OR51F1A6NGY5 319 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PRAMEF26H0Y7S4 382 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KHNYNO15037 678 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 LATO43561 262 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 AP1G1O43747 822 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A9O60656 530 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 OPHN1O60890 802 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 AVILO75366 819 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MTX2O75431 263 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ANXA9O76027 345 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TMEM63AO94886 807 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ECEL1O95672 775 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TRBC1P01850 177 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PRSS56P0CW18 603 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 THEGLP0DJG4 465 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CYP2A6P11509 494 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 MYF5P13349 255 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ENGP17813 658 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A6P19224 532 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A1P22309 533 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A4P22310 534 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 KCNA4P22459 653 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 HNRNPA2B1P22626 353 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 TGM1P22735 817 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CES1P23141 567 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CD38P28907 300 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 AKT2P31751 481 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 STIP1P31948 543 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ADRA1AP35348 466 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A3P35503 534 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 UGT1A5P35504 534 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PAFAH1B1P43034 410 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 PTGIRP43119 386 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 GRIA4P48058 902 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 POLD2P49005 469 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 CCR5P51681 352 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 C21orf59P57076 290 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SESN2P58004 480 aaPredicted RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 POLR2LP62875 67 aaKnown RBP4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC7A5Q01650 507 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 DR1Q01658 176 aa4.6□□□□□ -1.67
CHMP4A-202ENST00000524955 ELP6Q0PNE2 266 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms