RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 SSR1P43307 286 aaKnown RBP8.93□□□□□ -0.98
HDAC3-211ENST00000491581 AIF1P55008 147 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 YPEL5P62699 121 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DSC2Q02487 901 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 LY6DQ14210 128 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DPYSL2Q16555 572 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DOK6Q6PKX4 331 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 LRRC69Q6ZNQ3 347 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 Q6ZVL8 140 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DPPA4Q7L190 304 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 ZNF761Q86XN6 746 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-211ENST00000491581 NRROSQ86YC3 692 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 CASKIN2Q8WXE0 1202 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 COQ10AQ96MF6 247 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 WDR92Q96MX6 357 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 ZNF641Q96N77 438 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DUSP23Q9BVJ7 150 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 CEP41Q9BYV8 373 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 ATP13A3Q9H7F0 1226 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 POLR1BQ9H9Y6 1135 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 RDH14Q9HBH5 336 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 EPB41L5Q9HCM4 733 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 NT5MQ9NPB1 228 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 GOLGA6AQ9NYA3 693 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 MYO6Q9UM54 1294 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 DOLKQ9UPQ8 538 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 TMEM98Q9Y2Y6 226 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 PRKAB1Q9Y478 270 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 HYOU1Q9Y4L1 999 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 RNF215Q9Y6U7 377 aa8.93□□□□□ -0.98
HDAC3-211ENST00000491581 ZFC3H1O60293 1989 aaKnown RBP8.93□□□□□ -0.98
HDAC3-211ENST00000491581 ACACAQ13085 2346 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ARHGEF17Q96PE2 2063 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 CXorf51AA0A1B0GTR3 108 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 SMTNL1A8MU46 457 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 H3BRJ5 948 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 NTN3O00634 580 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TPP1O14773 563 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 RRP8O43159 456 aaKnown RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TNFSF15O95150 251 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 EML2O95834 649 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 SOD1P00441 154 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 CPP00450 1065 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 GP1BAP07359 652 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 GZMAP12544 262 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 WT1P19544 449 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 MPSTP25325 297 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 CASP14P31944 242 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ACTN2P35609 894 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 LSSP48449 732 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ARSEP51690 589 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 CDH6P55285 790 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 GBE1Q04446 702 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 NIPAL4Q0D2K0 466 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ELP6Q0PNE2 266 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 SLC10A2Q12908 348 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 PTK2BQ14289 1009 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ZNF235Q14590 738 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ACAP1Q15027 740 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 LLGL1Q15334 1064 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 FILIP1LQ4L180 1135 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ZNF648Q5T619 568 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 NCBP2-AS2Q69YL0 99 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ERAP2Q6P179 960 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 PNCKQ6P2M8 343 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 BRAT1Q6PJG6 821 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TMCO3Q6UWJ1 677 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 RBM44Q6ZP01 1051 aaKnown RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 MICALCLQ6ZW33 695 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 MARK2Q7KZI7 788 aaKnown RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TAF8Q7Z7C8 310 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 HEATR4Q86WZ0 1026 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 FAM46DQ8NEK8 389 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 OR56A4Q8NGH8 313 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 BTN2A2Q8WVV5 523 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 JPH3Q8WXH2 748 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 SCAMP4Q969E2 229 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 PSKH2Q96QS6 385 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 RBM15Q96T37 977 aaKnown RBP eCLIP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 NAT10Q9H0A0 1025 aaKnown RBP8.92□□□□□ -0.98
HDAC3-211ENST00000491581 SEMA6CQ9H3T2 930 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 RETREG1Q9H6L5 497 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 ARFGAP3Q9NP61 516 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 NENFQ9UMX5 172 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TFR2Q9UP52 801 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 TTLL3Q9Y4R7 772 aa8.92□□□□□ -0.98
HDAC3-211ENST00000491581 INPP4BO15327 924 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 HTRA2O43464 458 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-211ENST00000491581 B4GAT1O43505 415 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 HEXIM1O94992 359 aaKnown RBP8.91□□□□□ -0.98
HDAC3-211ENST00000491581 TNFP01375 233 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 CYP1A2P05177 515 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 CEACAM5P06731 702 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 CCDC172P0C7W6 258 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 CDK4P11802 303 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 MMP13P45452 471 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 GNPDA1P46926 289 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 CSNK1DP48730 415 aa8.91□□□□□ -0.98
HDAC3-211ENST00000491581 DUSP3P51452 185 aaPredicted RBP8.91□□□□□ -0.98
HDAC3-211ENST00000491581 UBASH3AP57075 661 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms