RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 SNX21Q969T3 373 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 FUBP1Q96AE4 644 aaKnown RBP8.68□□□□□ -1.02
SCRN1-208ENST00000438497 VOPP1Q96AW1 172 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 HMCESQ96FZ2 354 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 INTS4Q96HW7 963 aaKnown RBP8.68□□□□□ -1.02
SCRN1-208ENST00000438497 CPXM1Q96SM3 734 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 NPY6RQ99463 290 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 TSG101Q99816 390 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 ZYG11BQ9C0D3 744 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 FGF22Q9HCT0 170 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 FBXO8Q9NRD0 319 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 DKK3Q9UBP4 350 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 RCOR1Q9UKL0 485 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 CFAP45Q9UL16 551 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 HPCAL4Q9UM19 191 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 CNTN6Q9UQ52 1028 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 POLHQ9Y253 713 aa8.68□□□□□ -1.02
SCRN1-208ENST00000438497 MRPS18BQ9Y676 258 aaKnown RBP8.68□□□□□ -1.02
SCRN1-208ENST00000438497 TNRC6AQ8NDV7 1962 aaKnown RBP8.68□□□□□ -1.02
SCRN1-208ENST00000438497 IGHV1OR21-1A0A087WYE8 117 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 ANKRD36A6QL64 1941 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 TCP11X1B4DZS4 312 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 PMM2O15305 246 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 INPP4BO15327 924 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 STK17BO94768 372 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 PDGFAP04085 211 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 HOXC4P09017 264 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 THRAP10827 490 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 PFKFB1P16118 471 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 TFE3P19532 575 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 F8A1P23610 371 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 CMA1P23946 247 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 ETFBP38117 255 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SULT1E1P49888 294 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 LIG3P49916 1009 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SNX16P57768 344 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 KIAA1024LP59773 190 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 NR1D2Q14995 579 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 INPP5JQ15735 1006 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SNAP47Q5SQN1 464 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 FAM183BPQ6ZVS7 135 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SMYD4Q8IYR2 804 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 BMPERQ8N8U9 685 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 HCAR2Q8TDS4 363 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 AHCYL2Q96HN2 611 aaKnown RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 GSDMCQ9BYG8 508 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 TTYH3Q9C0H2 523 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SUDS3Q9H7L9 328 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 UBE2TQ9NPD8 197 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 ACP6Q9NPH0 428 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 TMEM9Q9P0T7 183 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 ZNF212Q9UDV6 495 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 TMEM184BQ9Y519 407 aaPredicted RBP8.67□□□□□ -1.02
SCRN1-208ENST00000438497 RPS6KL1Q9Y6S9 549 aa8.67□□□□□ -1.02
SCRN1-208ENST00000438497 SHANK1Q9Y566 2161 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 CDC14CA4D256 554 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 PDE2AO00408 941 aaPredicted RBP8.66□□□□□ -1.02
SCRN1-208ENST00000438497 POLR1CO15160 346 aaPredicted RBP8.66□□□□□ -1.02
SCRN1-208ENST00000438497 TEX33O43247 280 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 BUB1O43683 1085 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 KATNA1O75449 491 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 DAB1O75553 588 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 LDLRP01130 860 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 FURINP09958 794 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 BMP6P22004 513 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 GNA15P30679 374 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 TRIM23P36406 574 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 DLSTP36957 453 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 PRCPP42785 496 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 SYKP43405 635 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 DNM1Q05193 864 aaKnown RBP8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ILF3Q12906 894 aaKnown RBP eCLIP8.66□□□□□ -1.023e-8■■■■■ 28.1
SCRN1-208ENST00000438497 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
SCRN1-208ENST00000438497 RAPGEF1Q13905 1077 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 UGP2Q16851 508 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 NADK2Q4G0N4 442 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ATL3Q6DD88 541 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ERAP2Q6P179 960 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 SLC26A9Q7LBE3 791 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ARHGAP22Q7Z5H3 698 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 NRROSQ86YC3 692 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 SLC34A3Q8N130 599 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ESX1Q8N693 406 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 NETO2Q8NC67 525 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 PATE1Q8WXA2 126 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 ANKRD7Q92527 254 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 GDAP1L1Q96MZ0 367 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 LGR4Q9BXB1 951 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 MAGEH1Q9H213 219 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 SUV39H2Q9H5I1 410 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 CARS2Q9HA77 564 aaKnown RBP8.66□□□□□ -1.02
SCRN1-208ENST00000438497 APMAPQ9HDC9 416 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 PCDH12Q9NPG4 1184 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 TAAR2Q9P1P5 351 aa8.66□□□□□ -1.02
SCRN1-208ENST00000438497 MAP10Q9P2G4 905 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms