RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SMARCD2Q92925 531 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 GRAMD1AQ96CP6 724 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 SLC2A11Q9BYW1 496 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 ACTR5Q9H9F9 607 aaPredicted RBP21.02■□□□□ 0.96
GPC1-202ENST00000420138 ZNF358Q9NW07 568 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 SLCO3A1Q9UIG8 710 aa21.02■□□□□ 0.96
GPC1-202ENST00000420138 A0A096LPK6 155 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 A0A0U1RQS6 177 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MPOP05164 745 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 CISD3P0C7P0 127 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 IRF9Q00978 393 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 SEMA3AQ14563 771 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 GEN1Q17RS7 908 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 ARMC12Q5T9G4 340 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 N4BP2L1Q5TBK1 243 aaPredicted RBP21.01■□□□□ 0.95
GPC1-202ENST00000420138 LDB1Q86U70 411 aaPredicted RBP21.01■□□□□ 0.95
GPC1-202ENST00000420138 OR4K2Q8NGD2 314 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 GPR150Q8NGU9 434 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 LRRC8CQ8TDW0 803 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MYLIPQ8WY64 445 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MYO19Q96H55 970 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MECRQ9BV79 373 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 TMEM216Q9P0N5 145 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 SZT2Q5T011 3432 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.01■□□□□ 0.95
GPC1-202ENST00000420138 FAM95CA0A1B0GW59 222 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 PLIN3O60664 434 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 IGSF6O95976 241 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 S1PR4O95977 384 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 FCARP24071 287 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MAPK8P45983 427 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 GRIA4P48058 902 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 ECT2LQ008S8 904 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 ADAM15Q13444 863 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 FAM47EQ6ZV65 393 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 SLC41A1Q8IVJ1 513 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 CEP97Q8IW35 865 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 LMNTD2Q8IXW0 634 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 MICALL1Q8N3F8 863 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 BPIFB1Q8TDL5 484 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 EID2BQ96D98 161 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 TTYH1Q9H313 450 aaPredicted RBP21.01■□□□□ 0.95
GPC1-202ENST00000420138 TRPV4Q9HBA0 871 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 SIRPGQ9P1W8 387 aa21.01■□□□□ 0.95
GPC1-202ENST00000420138 COLQQ9Y215 455 aaPredicted RBP21.01■□□□□ 0.95
GPC1-202ENST00000420138 HOXC11O43248 304 aaPredicted RBP21■□□□□ 0.95
GPC1-202ENST00000420138 EDF1O60869 148 aaKnown RBP21■□□□□ 0.95
GPC1-202ENST00000420138 SOCS5O75159 536 aa21■□□□□ 0.95
GPC1-202ENST00000420138 POLD2P49005 469 aa21■□□□□ 0.95
GPC1-202ENST00000420138 SULT2A1Q06520 285 aa21■□□□□ 0.95
GPC1-202ENST00000420138 BCL2L1Q07817 233 aa21■□□□□ 0.95
GPC1-202ENST00000420138 ACTN3Q08043 901 aaPredicted RBP21■□□□□ 0.95
GPC1-202ENST00000420138 SF3A3Q12874 501 aaKnown RBP eCLIP21■□□□□ 0.95
GPC1-202ENST00000420138 USP10Q14694 798 aaKnown RBP21■□□□□ 0.95
GPC1-202ENST00000420138 GRIN2CQ14957 1233 aa21■□□□□ 0.95
GPC1-202ENST00000420138 RBM20Q5T481 1227 aaKnown RBP21■□□□□ 0.95
GPC1-202ENST00000420138 MBLAC2Q68D91 279 aa21■□□□□ 0.95
GPC1-202ENST00000420138 GET4Q7L5D6 327 aaPredicted RBP21■□□□□ 0.95
GPC1-202ENST00000420138 SPATA21Q7Z572 469 aa21■□□□□ 0.95
GPC1-202ENST00000420138 C12orf40Q86WS4 652 aa21■□□□□ 0.95
GPC1-202ENST00000420138 ZSWIM9Q86XI8 627 aa21■□□□□ 0.95
GPC1-202ENST00000420138 ST13P5Q8NFI4 369 aaPredicted RBP21■□□□□ 0.95
GPC1-202ENST00000420138 MRGPRX3Q96LB0 322 aa21■□□□□ 0.95
GPC1-202ENST00000420138 OMDQ99983 421 aa21■□□□□ 0.95
GPC1-202ENST00000420138 PLCD4Q9BRC7 762 aa21■□□□□ 0.95
GPC1-202ENST00000420138 C1QTNF1Q9BXJ1 281 aa21■□□□□ 0.95
GPC1-202ENST00000420138 CEP44Q9C0F1 390 aa21■□□□□ 0.95
GPC1-202ENST00000420138 MANSC1Q9H8J5 431 aa21■□□□□ 0.95
GPC1-202ENST00000420138 GDE1Q9NZC3 331 aa21■□□□□ 0.95
GPC1-202ENST00000420138 MYOFQ9NZM1 2061 aa21■□□□□ 0.95
GPC1-202ENST00000420138 TMEM265A0A087WTH1 108 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 C2orf81A6NN90 581 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 PROCP04070 461 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 SLC35E2BP0CK96 405 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 ADH5P11766 374 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 ARSAP15289 507 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 HOXB8P17481 243 aaPredicted RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 LPOP22079 712 aaPredicted RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 TAS2R39P59534 338 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 GAB4Q2WGN9 574 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 MYLK3Q32MK0 819 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 CES4AQ5XG92 561 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 AHI1Q8N157 1196 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 OR4L1Q8NH43 312 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 ZFYVE19Q96K21 471 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 PITPNM3Q9BZ71 974 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 MAGEE1Q9HCI5 957 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 SLC25A13Q9UJS0 675 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 OTOL1A6NHN0 477 aaPredicted RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 CD3EAPO15446 510 aaKnown RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 PHGDHO43175 533 aaKnown RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 BPGMP07738 259 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 GSTA1P08263 222 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 ALPIP09923 528 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 PRSS56P0CW18 603 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 CTPS1P17812 591 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 BGNP21810 368 aa20.99■□□□□ 0.95
GPC1-202ENST00000420138 RPL26P61254 145 aaKnown RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 SNRPD1P62314 119 aaKnown RBP20.99■□□□□ 0.95
GPC1-202ENST00000420138 ETFBKMTQ8IXQ9 262 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms