RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 TMEM35BQ8NCS4 154 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 OR56A4Q8NGH8 313 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 SPATA20Q8TB22 786 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 KIAA1524Q8TCG1 905 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 NT5C3BQ969T7 300 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 VOPP1Q96AW1 172 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 C18orf8Q96DM3 657 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 PGAP3Q96FM1 320 aaPredicted RBP6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 HMCESQ96FZ2 354 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM81BQ96LP2 452 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 MAGEB5Q9BZ81 275 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 TTYH3Q9C0H2 523 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 RAB6CQ9H0N0 254 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 LRRC4CQ9HCJ2 640 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 CYP4F12Q9HCS2 524 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 PCDH12Q9NPG4 1184 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 METTL5Q9NRN9 209 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 PPARGC1AQ9UBK2 798 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 APEX2Q9UBZ4 518 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 ANAPC2Q9UJX6 822 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 DNAJC12Q9UKB3 198 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 DAAM1Q9Y4D1 1078 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 ATP6V1DQ9Y5K8 247 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 DOCK4Q8N1I0 1966 aa6.94□□□□□ -1.3
NPIPB3-203ENST00000504841 LRRK1Q38SD2 2015 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 IGHV5-10-1A0A0J9YXX1 117 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM72CH0Y354 149 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FOXN3O00409 490 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 NKX2-8O15522 239 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 TEX33O43247 280 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MTSS1O43312 755 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 B4GAT1O43505 415 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 NUDT21O43809 227 aaKnown RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 LRIG2O94898 1065 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FGF3P11487 239 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 PNLIPP16233 465 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 RHOQP17081 205 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 NR1D1P20393 614 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 BMP6P22004 513 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 KELP23276 732 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 CSTF2P33240 577 aaKnown RBP eCLIP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 UGT1A3P35503 534 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MAPKAPK2P49137 400 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 LIG3P49916 1009 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 ARSDP51689 593 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MARSP56192 900 aaKnown RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 B4GALNT1Q00973 533 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MTM1Q13496 603 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 RAPGEF1Q13905 1077 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 EXOC3L4Q17RC7 722 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 C15orf59Q2T9L4 293 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 ACBD5Q5T8D3 534 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM72AQ5TYM5 149 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MANEALQ5VSG8 457 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 NKAIN2Q5VXU1 208 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 ANKS6Q68DC2 871 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM72DQ6L9T8 149 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 C16orf46Q6P387 395 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FAM72BQ86X60 149 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 ZSWIM9Q86XI8 627 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 XYLT1Q86Y38 959 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 UNC5BQ8IZJ1 945 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 PLA2G15Q8NCC3 412 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 CCDC112Q8NEF3 446 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 PATE1Q8WXA2 126 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 FUBP1Q96AE4 644 aaKnown RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 KIAA1143Q96AT1 154 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 TBC1D31Q96DN5 1066 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 RNF31Q96EP0 1072 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 PSMG3-AS1Q96PY0 264 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 TAAR9Q96RI9 348 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 KLC2Q9H0B6 622 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 MAGEH1Q9H213 219 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 GPN2Q9H9Y4 310 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 TMEM248Q9NWD8 314 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 SLC39A1Q9NY26 324 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 DKK3Q9UBP4 350 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 LHX3Q9UBR4 397 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 OR12D3Q9UGF7 316 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 ATP8A1Q9Y2Q0 1164 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 DGKBQ9Y6T7 804 aa6.93□□□□□ -1.3
NPIPB3-203ENST00000504841 PRSS38A1L453 326 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 CLEC18AA5D8T8 446 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GOLGA6CA6NDK9 693 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GOLGA6BA6NDN3 693 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ZSCAN5CA6NGD5 496 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 PRR19A6NJB7 356 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 EFCAB7A8K855 629 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 A8MU76 341 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 A8MX80 341 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 HGSO14964 777 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 KDELR3O43731 214 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 RECQL5O94762 991 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ECEL1O95672 775 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 ELFN1P0C7U0 828 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 GOLGA6DP0CG33 693 aa6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 AK4P27144 223 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-203ENST00000504841 PON1P27169 355 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms