RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 OMDQ99983 421 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ABCB9Q9NP78 766 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 CYP4B1P13584 511 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 POLR2EP19388 210 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 S100PP25815 95 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ARMC12Q5T9G4 340 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 NOL11Q9H8H0 719 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 MAN2B2Q9Y2E5 1009 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 SH3BGRLO75368 114 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 THOP1P52888 689 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 CYP4F8P98187 520 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 RAD9BQ6WBX8 426 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 LZTR1Q8N653 840 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZKSCAN4Q969J2 545 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TUBGCP5Q96RT8 1024 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 C3orf14Q9HBI5 128 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 KLK14Q9P0G3 267 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 MAPKBP1O60336 1514 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 GPATCH8Q9UKJ3 1502 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 FDPSP14324 419 aaKnown RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 THPOP40225 353 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TBX4P57082 545 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 ALG10Q5BKT4 473 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 RETSATQ6NUM9 610 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 KATNAL2Q8IYT4 538 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 DNAJB14Q8TBM8 379 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 MKL1Q969V6 931 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 PFDN5Q99471 154 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 CDHR5Q9HBB8 845 aa13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 PAK6Q9NQU5 681 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P12-202ENST00000559989 TPP1O14773 563 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 MFSD10Q14728 455 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 XRRA1Q6P2D8 792 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 GJB7Q6PEY0 223 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 CXorf40AQ8TE69 158 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 CGRRF1Q99675 332 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 RBM4BQ9BQ04 359 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 RBM4Q9BWF3 364 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 FBXL21Q9UKT6 434 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TBX22Q9Y458 520 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 PAPSS2O95340 614 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 CATP04040 527 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 ZNF557Q8N988 423 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 MXRA8Q9BRK3 442 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMEM165Q9HC07 324 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 CORO1CQ9ULV4 474 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 RIIAD1A6NNX1 92 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TP73O15350 636 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 THP07101 528 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SLC10A7Q0GE19 358 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 APTXQ7Z2E3 356 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 MB21D2Q8IYB1 491 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 PCDH20Q8N6Y1 951 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SNX33Q8WV41 574 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMEM176AQ96HP8 235 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SEMA4BQ9NPR2 832 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 AP5Z1O43299 807 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 PTENP60484 403 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SP140Q13342 867 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 ADNP2Q6IQ32 1131 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SYNE4Q8N205 404 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 OR2L2Q8NH16 312 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 C1orf216Q8TAB5 229 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 ORAI2Q96SN7 254 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 LRMDAQ9H2I8 198 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 RC3H2Q9HBD1 1191 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 REXO2Q9Y3B8 237 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 HEG1Q9ULI3 1381 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 QSOX1O00391 747 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 PIK3CBP42338 1070 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 AP2S1P53680 142 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 ARSJQ5FYB0 599 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TMCO6Q96DC7 493 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 IL22Q9GZX6 179 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 SMURF1Q9HCE7 757 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 MTMR10Q9NXD2 777 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TRPS1Q9UHF7 1281 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 CPDO75976 1380 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 PRMT5O14744 637 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 COX4I1P13073 169 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 AXLP30530 894 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 LIPEQ05469 1076 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 EGFLAMQ63HQ2 1017 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 ISLR2Q6UXK2 745 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 LINGO2Q7L985 606 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 NKAPQ8N5F7 415 aaKnown RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 KCTD4Q8WVF5 259 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 NKD1Q969G9 470 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 C16orf58Q96GQ5 468 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 RTKNQ9BST9 563 aa13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 TIMM8BQ9Y5J9 83 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P12-202ENST00000559989 LTA4HP09960 611 aaKnown RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ITPKBP27987 946 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 PLK1P53350 603 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ST3GAL1Q11201 340 aa13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 ZNF772Q68DY9 489 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P12-202ENST00000559989 RAB12Q6IQ22 244 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms