RNA–Protein interactions for RNA: ENST00000409326.6

PTCD3-202, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 522 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-202ENST00000409326 CD86P42081 329 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SKOR1P84550 965 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SLC14A2Q15849 920 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 CSRP2Q16527 193 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 DUOXA1Q1HG43 343 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 ZNF284Q2VY69 593 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SETMARQ53H47 684 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SEL1L3Q68CR1 1132 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 ALYREFQ86V81 257 aaKnown RBP20.44■□□□□ 0.86
PTCD3-202ENST00000409326 ZNF567Q8N184 647 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 GPR161Q8N6U8 529 aaKnown RBP20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SLC35B2Q8TB61 432 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 FRMD8P1Q9BZ68 369 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SMOC1Q9H4F8 434 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 TRHDEQ9UKU6 1024 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 PHTF1Q9UMS5 762 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 DMTF1Q9Y222 760 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 SLCO1B1Q9Y6L6 691 aa20.44■□□□□ 0.86
PTCD3-202ENST00000409326 PTPRZ1P23471 2315 aaPredicted RBP20.44■□□□□ 0.86
PTCD3-202ENST00000409326 A0A1B0GTW7 788 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 BCAT2O15382 392 aaPredicted RBP20.43■□□□□ 0.86
PTCD3-202ENST00000409326 KCNN4O15554 427 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 CEP104O60308 925 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 PRKCGP05129 697 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 TMEM52BQ4KMG9 183 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 TRIM61Q5EBN2 209 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 SLC23A3Q6PIS1 610 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 ADAT2Q7Z6V5 191 aaKnown RBP20.43■□□□□ 0.86
PTCD3-202ENST00000409326 CXorf40AQ8TE69 158 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 TADA1Q96BN2 335 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 PBKQ96KB5 322 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 RBM15Q96T37 977 aaKnown RBP eCLIP20.43■□□□□ 0.86
PTCD3-202ENST00000409326 USP29Q9HBJ7 922 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 DNPEPQ9ULA0 475 aa20.43■□□□□ 0.86
PTCD3-202ENST00000409326 TMEM131Q92545 1883 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PRR5-ARHGAP8B1AHC4 643 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PATE3B3GLJ2 98 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 KHNYNO15037 678 aaKnown RBP20.42■□□□□ 0.86
PTCD3-202ENST00000409326 FGGP02679 453 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PDHA1P08559 390 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 NFKB1P19838 968 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 NFKBIAP25963 317 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 SIX1Q15475 284 aaPredicted RBP20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PID1Q7Z2X4 250 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PIH1D2Q8WWB5 315 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 MAIP1Q8WWC4 291 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 ATG4AQ8WYN0 398 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 PCDH9Q9HC56 1237 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 TM9SF3Q9HD45 589 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 CHKBQ9Y259 395 aa20.42■□□□□ 0.86
PTCD3-202ENST00000409326 CFAP69A5D8W1 941 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 LIASO43766 372 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 FOXD2O60548 495 aaPredicted RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 STK10O94804 968 aaKnown RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 RPL26P61254 145 aaKnown RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 GNG11P61952 73 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 RACK1P63244 317 aaKnown RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 FAM193AP78312 1265 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 RALGDSQ12967 914 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 FGL2Q14314 439 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 TCEAL6Q6IPX3 200 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 NAPEPLDQ6IQ20 393 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 PRR23CQ6ZRP0 262 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 DPPA4Q7L190 304 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 RASGEF1CQ8N431 466 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 ASB12Q8WXK4 309 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 KLK6Q92876 244 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 TCEAL3Q969E4 200 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 SERAC1Q96JX3 654 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 SLC6A18Q96N87 628 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 SPATA13Q96N96 652 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 FCRL5Q96RD9 977 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 WRAP53Q9BUR4 548 aaKnown RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 C1QTNF2Q9BXJ5 285 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 SLC17A9Q9BYT1 436 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 CAPN10Q9HC96 672 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 RPL26L1Q9UNX3 145 aaKnown RBP20.41■□□□□ 0.86
PTCD3-202ENST00000409326 ZKSCAN5Q9Y2L8 839 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 PPIL1Q9Y3C6 166 aa20.41■□□□□ 0.86
PTCD3-202ENST00000409326 IGLON5A6NGN9 336 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 PRAMEF26H0Y7S4 382 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 SLC31A1O15431 190 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 MMP20O60882 483 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 MT-CYBP00156 380 aaPredicted RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 PRLP01236 227 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 CFIP05156 583 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 PRLRP16471 622 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 GRIA4P48058 902 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 AFF3P51826 1226 aaKnown RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 SF3A2Q15428 464 aaKnown RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 OASLQ15646 514 aaKnown RBP20.4■□□□□ 0.86
PTCD3-202ENST00000409326 LONRF2Q1L5Z9 754 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 ANKRD20A2Q5SQ80 823 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 ANKRD20A1Q5TYW2 823 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 ANKRD20A3Q5VUR7 823 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 ITPRIPL1Q6GPH6 555 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 USP45Q70EL2 814 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 NDUFAF2Q8N183 169 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 SPATA22Q8NHS9 363 aa20.4■□□□□ 0.86
PTCD3-202ENST00000409326 C1orf54Q8WWF1 131 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms