RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.54
SMG6-202ENST00000354901 NAP1L2Q9ULW6 460 aaPredicted RBP11.71□□□□□ -0.54
SMG6-202ENST00000354901 PRKAR2BP31323 418 aa11.7□□□□□ -0.54
SMG6-202ENST00000354901 HDGFP51858 240 aaKnown RBP11.7□□□□□ -0.54
SMG6-202ENST00000354901 DLC1Q96QB1 1528 aa11.7□□□□□ -0.54
SMG6-202ENST00000354901 ATF7IPQ6VMQ6 1270 aa11.7□□□□□ -0.54
SMG6-202ENST00000354901 TBC1D2Q9BYX2 928 aa11.7□□□□□ -0.54
SMG6-202ENST00000354901 NLRP1Q9C000 1473 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 ALKQ9UM73 1620 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 ABCC11Q96J66 1382 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 UQCRHLA0A096LP55 91 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 UQCRHP07919 91 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 USP32Q8NFA0 1604 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 NSD2O96028 1365 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 LNPKQ9C0E8 428 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
SMG6-202ENST00000354901 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
SMG6-202ENST00000354901 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
SMG6-202ENST00000354901 TAF7LQ5H9L4 462 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 ZRANB1Q9UGI0 708 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 RIMS2Q9UQ26 1411 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 TNRQ92752 1358 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 KLHL34Q8N239 644 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 DDX19BQ9UMR2 479 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 NCKAP5LQ9HCH0 1330 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 TBC1D32Q96NH3 1257 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 EMILIN1Q9Y6C2 1016 aa11.68□□□□□ -0.54
SMG6-202ENST00000354901 IGSF3O75054 1194 aa11.67□□□□□ -0.54
SMG6-202ENST00000354901 PHACTR3Q96KR7 559 aa11.67□□□□□ -0.54
SMG6-202ENST00000354901 ATAD2Q6PL18 1390 aa11.67□□□□□ -0.54
SMG6-202ENST00000354901 SETD1AO15047 1707 aaKnown RBP11.67□□□□□ -0.54
SMG6-202ENST00000354901 NUTM2FA1L443 756 aa11.66□□□□□ -0.54
SMG6-202ENST00000354901 GAS2L3Q86XJ1 694 aa11.66□□□□□ -0.54
SMG6-202ENST00000354901 YTHDC2Q9H6S0 1430 aaKnown RBP11.66□□□□□ -0.54
SMG6-202ENST00000354901 UBR1Q8IWV7 1749 aa11.66□□□□□ -0.54
SMG6-202ENST00000354901 KNDC1Q76NI1 1749 aa11.66□□□□□ -0.54
SMG6-202ENST00000354901 FER1L4A9Z1Z3 1794 aa11.65□□□□□ -0.54
SMG6-202ENST00000354901 C22orf23Q9BZE7 217 aa11.65□□□□□ -0.54
SMG6-202ENST00000354901 SOX12O15370 315 aa11.65□□□□□ -0.54
SMG6-202ENST00000354901 NME9Q86XW9 330 aa11.65□□□□□ -0.54
SMG6-202ENST00000354901 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
SMG6-202ENST00000354901 GTF2E1P29083 439 aaPredicted RBP11.65□□□□□ -0.55
SMG6-202ENST00000354901 CBX1P83916 185 aa11.65□□□□□ -0.55
SMG6-202ENST00000354901 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.55
SMG6-202ENST00000354901 TSPYL6Q8N831 410 aa11.65□□□□□ -0.55
SMG6-202ENST00000354901 PTPRMP28827 1452 aa11.64□□□□□ -0.55
SMG6-202ENST00000354901 IPO8O15397 1037 aaKnown RBP11.64□□□□□ -0.55
SMG6-202ENST00000354901 DNTTIP2Q5QJE6 756 aaKnown RBP11.64□□□□□ -0.55
SMG6-202ENST00000354901 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.64□□□□□ -0.55
SMG6-202ENST00000354901 TXNDC2Q86VQ3 553 aa11.64□□□□□ -0.55
SMG6-202ENST00000354901 MPNDQ8N594 471 aa11.64□□□□□ -0.55
SMG6-202ENST00000354901 DCTN1Q14203 1278 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 TSC1Q92574 1164 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 C3P01024 1663 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 ANTXR1Q9H6X2 564 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 FAM83GA6ND36 823 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
SMG6-202ENST00000354901 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
SMG6-202ENST00000354901 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 JARID2Q92833 1246 aaPredicted RBP11.63□□□□□ -0.55
SMG6-202ENST00000354901 SIRT1Q96EB6 747 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 KIF16BQ96L93 1317 aa11.63□□□□□ -0.55
SMG6-202ENST00000354901 FCHSD2O94868 740 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 ZBTB40Q9NUA8 1239 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 NRXN3Q9Y4C0 1643 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 FAM177BA6PVY3 158 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 CHMP5Q9NZZ3 219 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 CDK11BP21127 795 aaKnown RBP11.62□□□□□ -0.55
SMG6-202ENST00000354901 ZSCAN30Q86W11 494 aa11.62□□□□□ -0.55
SMG6-202ENST00000354901 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
SMG6-202ENST00000354901 HDAC1Q13547 482 aaPredicted RBP11.61□□□□□ -0.55
SMG6-202ENST00000354901 ZBTB22O15209 634 aa11.61□□□□□ -0.55
SMG6-202ENST00000354901 SMC5Q8IY18 1101 aa11.6□□□□□ -0.55
SMG6-202ENST00000354901 TMEM2Q9UHN6 1383 aa11.6□□□□□ -0.55
SMG6-202ENST00000354901 SLIT1O75093 1534 aa11.6□□□□□ -0.55
SMG6-202ENST00000354901 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
SMG6-202ENST00000354901 TECPR2O15040 1411 aa11.6□□□□□ -0.55
SMG6-202ENST00000354901 SMAP1Q8IYB5 467 aaPredicted RBP11.6□□□□□ -0.55
SMG6-202ENST00000354901 OFD1O75665 1012 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 NFE2L2Q16236 605 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 HSCBQ8IWL3 235 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 FAM135BQ49AJ0 1406 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 IL16Q14005 1332 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 DDX11L8A8MPP1 907 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
SMG6-202ENST00000354901 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 CPS1P31327 1500 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 APBB1O00213 710 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 NCBP3Q53F19 620 aaKnown RBP11.59□□□□□ -0.55
SMG6-202ENST00000354901 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 CHD1LQ86WJ1 897 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 MAP7D2Q96T17 732 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 MBIPQ9NS73 344 aa11.59□□□□□ -0.55
SMG6-202ENST00000354901 VIRMAQ69YN4 1812 aaKnown RBP11.59□□□□□ -0.55
SMG6-202ENST00000354901 DIP2AQ14689 1571 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 VAMP4O75379 141 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 PLEKHG1Q9ULL1 1385 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 KRT24Q2M2I5 525 aa11.58□□□□□ -0.56
SMG6-202ENST00000354901 ARHGAP23Q9P227 1491 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms