RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 IFI16Q16666 785 aaKnown RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 SETMARQ53H47 684 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 RALGPS1Q5JS13 557 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 ATXN7L2Q5T6C5 722 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 MARC1Q5VT66 337 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 NCBP2-AS2Q69YL0 99 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 KIAA1161Q6NSJ0 714 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TIGD7Q6NT04 549 aaPredicted RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 C11orf63Q6NUN7 778 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 RAD9BQ6WBX8 426 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 SRLQ86TD4 932 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TTC7BQ86TV6 843 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 CPNE8Q86YQ8 564 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 SPC24Q8NBT2 197 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 OR6K2Q8NGY2 324 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 RAPGEF5Q92565 580 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 FATE1Q969F0 183 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 KLHL32Q96NJ5 620 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TSGA13Q96PP4 275 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 RNF157Q96PX1 679 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 ORAI3Q9BRQ5 295 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 SUV39H2Q9H5I1 410 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 TM9SF3Q9HD45 589 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
TPM4-207ENST00000588032 RIF1Q5UIP0 2472 aaKnown RBP10.24□□□□□ -0.77
TPM4-207ENST00000588032 TNRC6BQ9UPQ9 1833 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 CEP192Q8TEP8 1941 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 NUP205Q92621 2012 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 A0A1W2PQ67 120 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 C4orf47A7E2U8 309 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 PRAMEF26H0Y7S4 382 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 TM4SF5O14894 197 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 VILLO15195 856 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 PJA2O43164 708 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 OPHN1O60890 802 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 PCDH8O95206 1070 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 CER1O95813 267 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 UGT2B4P06133 528 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 CES1P23141 567 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 CD38P28907 300 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 SERPINA4P29622 427 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 GKP32189 559 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 GARSP41250 739 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 CSNK1EP49674 416 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 VAV2P52735 878 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 AP1S1P61966 158 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 POLR2LP62875 67 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 RPS21P63220 83 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 SLC10A7Q0GE19 358 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 SLC14A1Q13336 389 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 ZNF235Q14590 738 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 STAT4Q14765 748 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 CFAP58Q5T655 872 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 NAPEPLDQ6IQ20 393 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 BRAT1Q6PJG6 821 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 ARHGAP36Q6ZRI8 547 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 BZW1Q7L1Q6 419 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 ERMP1Q7Z2K6 904 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 ADAT2Q7Z6V5 191 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 DAAM2Q86T65 1068 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 KIAA1328Q86T90 577 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 IQCHQ86VS3 1027 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 HORMAD1Q86X24 394 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 TP53INP2Q8IXH6 220 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 RCOR2Q8IZ40 523 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 PQLC3Q8N755 202 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 MFSD2AQ8NA29 543 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 TSEN2Q8NCE0 465 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 TPCN2Q8NHX9 752 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 FAM174AQ8TBP5 190 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 ASB12Q8WXK4 309 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 VOPP1Q96AW1 172 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 SERAC1Q96JX3 654 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 ZNF830Q96NB3 372 aaPredicted RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 ATP13A3Q9H7F0 1226 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 KLHL11Q9NVR0 708 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 DNAAF2Q9NVR5 837 aaKnown RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 AMACRQ9UHK6 382 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 FADS3Q9Y5Q0 445 aa10.23□□□□□ -0.77
TPM4-207ENST00000588032 EP300Q09472 2414 aaPredicted RBP10.23□□□□□ -0.77
TPM4-207ENST00000588032 SDK1Q7Z5N4 2213 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 A0A1W2PQU0 124 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 TSPAN11A1L157 253 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 C3orf70A6NLC5 250 aaPredicted RBP10.22□□□□□ -0.77
TPM4-207ENST00000588032 UPK3BL1B0FP48 263 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 UPK3BL2E5RIL1 263 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 RNF103O00237 685 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 NEMP1O14524 444 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 APOL1O14791 398 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 MATN3O15232 486 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 ZRANB2O95218 330 aaKnown RBP eCLIP10.22□□□□□ -0.77
TPM4-207ENST00000588032 PEX11BO96011 259 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 KRT1P04264 644 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 ZNF883P0CG24 379 aa10.22□□□□□ -0.77
TPM4-207ENST00000588032 XPAP23025 273 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms